Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02145 ATGATCAGAATATCACGCCTCGCGTTATTTCTTCCGTTTATTTTTTCTTTATTCCTCGTAAATACTGGCCAATTGGTATCTGCAAAAGGGAAAAACAATGTTAAAGATGCATGCAGAGTAACTAGGTATCCAGACCTTTGTATACGCTCGCTAGCACCATTCTCTGACAGTGCTGGAAGAAGCCCCAGCAAGTGGGCAAGGGCAGGAGTGTCAGTGACAATTGGTGAGGTTAAGAATGTTCAAGCATATCTGGTAAACTTGAAGAACCATGGGCATATAAGAGGAAGAAACAGAGTTGCACTTACAGATTGTGTTGAGTCATTTGCAGATGCCCTTGATGAGCTTCACAGGTCACTGGGTGTGCTCAGAAGGTTAAGCAGAAGCACATTTGGTACCCAGATGGGGGACCTCAACACATGGTTAAGTGCAGCACTCACAGATGAAGATACTTGCCTTGATGGGTTTCAAGGCAAAAACGGGAGGAAAATCAAATTGCTGCAAAATCGGGTTCTGAAAGTCTATTATATAACCAGTAACGCTCTTGCTCTTGTCAACAAACTTGCCACTACAGGTCTAGGAAGCATATCTGATCCATAA 597 0.4322 MIRISRLALFLPFIFSLFLVNTGQLVSAKGKNNVKDACRVTRYPDLCIRSLAPFSDSAGRSPSKWARAGVSVTIGEVKNVQAYLVNLKNHGHIRGRNRVALTDCVESFADALDELHRSLGVLRRLSRSTFGTQMGDLNTWLSAALTDEDTCLDGFQGKNGRKIKLLQNRVLKVYYITSNALALVNKLATTGLGSISDP* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02145 198 PANTHER PECTINESTERASE INHIBITOR-LIKE 12 183 - -
Rops6g02145 198 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 32 187 IPR035513 -
Rops6g02145 198 Pfam Plant invertase/pectin methylesterase inhibitor 33 183 IPR006501 GO:0004857
Rops6g02145 198 CDD PMEI-like_3 37 189 - -
Rops6g02145 198 SMART PMEI_2 29 183 IPR006501 GO:0004857
Rops6g02145 198 NCBIfam pectinesterase inhibitor domain 7 187 IPR006501 GO:0004857
Rops6g02145 198 Gene3D Invertase/pectin methylesterase inhibitor family protein 28 189 IPR035513 -
Rops6g02145 198 FunFam Pectinesterase inhibitor 3 29 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02145 Rops-Chr6 39748363 39749269 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02145 34 196 Carbohydrate Esterase AT3G14310 31.138 6.97e-19 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02145 - - gmx:100791264 258.07