Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops6g02141 | ATGAGTGGAGCGAAAGGGAAGAAGAAGGGGGCAAGCTTCGTGATCGATTGCGCGAAGCCGGTGGAAGATAAGATTATGGATATTGCTTCTCTTGAGAAGTTTCTTCAGGAGAGGATTAAGGTTGGTGGCAAGGCTGGTGCCCTTGGTGATTCTGTTACCGTTACCCGTGAAAAGAGCAAGATCACTGTCACCTCCGACAGCAACTTCTCTAAACGGTATTTGAAATACTTAACCAAGAAGTACTTGAAAAAGCACAATGTGAGGGATTGGCTTCGGGTGATTGCCTCCAACAAGGACCGGAATATCTATGAGTTGAGATACTTCAACATTGCTGAGAATGAGGGTGAAGAGGAAGACTGA | 360 | 0.4583 | MSGAKGKKKGASFVIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNIYELRYFNIAENEGEEED* | 120 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops6g02141 | 119 | Pfam | Ribosomal L22e protein family | 9 | 117 | IPR002671 | GO:0003735|GO:0005840|GO:0006412 | |
Rops6g02141 | 119 | PANTHER | 60S RIBOSOMAL PROTEIN L22 | 3 | 119 | IPR002671 | GO:0003735|GO:0005840|GO:0006412 | |
Rops6g02141 | 119 | FunFam | 60S ribosomal protein L22-2 | 1 | 119 | - | - | |
Rops6g02141 | 119 | Gene3D | - | 1 | 119 | IPR038526 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops6g02141 | Rops-Chr6 | 39716946 | 39718390 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops6g02141 | 4 | 119 | Cytoplasmic Ribosomal Protein Gene Family | AT3G05560 | 90.517 | 1.76e-65 | 192 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Rops6g02141 | 6 | 39716946 | 39718390 | Rops6g02141 | 6 | 39716946 | 39718390 | ECH | |
Rops6g01878 | 6 | 36653599 | 36662832 | Rops6g02141 | 6 | 39716946 | 39718390 | ECH |