Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02141 ATGAGTGGAGCGAAAGGGAAGAAGAAGGGGGCAAGCTTCGTGATCGATTGCGCGAAGCCGGTGGAAGATAAGATTATGGATATTGCTTCTCTTGAGAAGTTTCTTCAGGAGAGGATTAAGGTTGGTGGCAAGGCTGGTGCCCTTGGTGATTCTGTTACCGTTACCCGTGAAAAGAGCAAGATCACTGTCACCTCCGACAGCAACTTCTCTAAACGGTATTTGAAATACTTAACCAAGAAGTACTTGAAAAAGCACAATGTGAGGGATTGGCTTCGGGTGATTGCCTCCAACAAGGACCGGAATATCTATGAGTTGAGATACTTCAACATTGCTGAGAATGAGGGTGAAGAGGAAGACTGA 360 0.4583 MSGAKGKKKGASFVIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNIYELRYFNIAENEGEEED* 120
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02141 119 Pfam Ribosomal L22e protein family 9 117 IPR002671 GO:0003735|GO:0005840|GO:0006412
Rops6g02141 119 PANTHER 60S RIBOSOMAL PROTEIN L22 3 119 IPR002671 GO:0003735|GO:0005840|GO:0006412
Rops6g02141 119 FunFam 60S ribosomal protein L22-2 1 119 - -
Rops6g02141 119 Gene3D - 1 119 IPR038526 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Rops6g02141 Rops-Chr6 39716946 39718390 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02141 4 119 Cytoplasmic Ribosomal Protein Gene Family AT3G05560 90.517 1.76e-65 192
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g02141 6 39716946 39718390 Rops6g02141 6 39716946 39718390 ECH
Rops6g01878 6 36653599 36662832 Rops6g02141 6 39716946 39718390 ECH