Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02139 ATGGTTGGATTATCCAGTATACTGGGGCATGAGAAATGTCAAAGCTACTTAATTTTCAGTGGAGAAACTGCTCTCGGGGAAAATTTTCGGATATTTTTATATTTTCTTGGCCTTGCCTATTGTTTCATTGGATTATCGGCTATAACAGCTTGCTTCTTTAAATCTATGGAAAACGTGGTCAAGCACACTAGGGAGGTAGTGGAGGTAGATCGTGTTACTAAAACTGAAATTATTAGACATGAAAAGGTTTGGAATTACACAATTGCGGATATTAGCCTGTTGGCCTTTGGAACTAGCTTTCCTCAGATATCATTAGCCACCATTGATGCTATACGAAATATTGGGCAAGTGTATGCTGGAGGTTTGGGACCTGGAACACTTGTTGGTTCTGCAGCATTTGACCTTTTCCCGATCCACGCTGTTTGTGTAGTAGTTCCAAAGGCAGGAGAGCTGAAAAAGATTGCTGATCTAGGAGTATGGGTGGTGGAGCTGTTTTGGTCATTTTGGGCTTACATTTGGTTATACATAATTTTGGAGGTATGGACTCCAAACGTGGTGACTCTATGGGAGGCCTTGTTGACAGTACTGATGTATGGATTACTGTTGACTCATGCTTATGCTCAAGACAAACGTTGGCCCTATATTTCTCTACCCATTGCAAGAGATGAAAGGCCAGAGGATTGGGTGCCAGAAGAGACTCCTTGTTTTAAACAAGAAGCTCATGAGAAGGTGGAATGCTCTGAGGTAATTCATGTTAATAAAGAAAATGGAGAAACTGTTGATATCTTTTCCATTCATTCAGGAAACCCCACAGAAACGTTATATGTAAGAGTACCTCAAACAGATGATGTTACTGAAATTTCTGACAAAGCTATGGAAACAACATTGGGTGGTACCCATTTGCTTAAAATTTGGAGACAGCAATTTGTGGATGCACTGAGGTTGGAGAGCCAAGAATCAAAAAAAATGAACAATGTGCATCTTCGCATAGCTCAAAAATTCTGGCAATTGCTGCTTTTACCATGGAGATTTCTGTTTGCTTTTGTTCCTCCATGCCATATTGCTCATGGATGGATCTCTTTCATTTGCTCTCTGCTTTTCATCAGCTGGATAGCTTACATTGTGACTATGCTCACAGATCTTATAAGTTGTGTCACAGGAATAAATGCTTATGTCATAGCATTTACAGCATTAGCCAGTGGAACCTCATGGCCTGATTTAGTGGCAAGCAAGATTGCTGCTGAACGTCAAAAAACTGCGGACTCTGCAATTGCAAACATCACTTGCAGTAACTCAGTGAATATATATGTTGGCATTGGTGTTCCATGGCTTATTGATACCCTGTACAACTTCATAGCATATAGAGAACCTCTCCGAATCCAAAATGCAGGGGGACTAAGCTTTTCGTTGATTGTTTTCTTCTCCACTTCTGTTGGGTGTATCTCAGTTTTGGTTATTAGGCGTCTAGTTTTTGGTGCAGAGTTAGGAGGGCCAAGGCTCTGGGCTTGGATTACATGTGCGTTCTTCATGTTTCTGTGGATTATTTTTGTTGTACTATCTTCACTCAAGGTTTCCGGATTCATTTAG 1587 0.4071 MVGLSSILGHEKCQSYLIFSGETALGENFRIFLYFLGLAYCFIGLSAITACFFKSMENVVKHTREVVEVDRVTKTEIIRHEKVWNYTIADISLLAFGTSFPQISLATIDAIRNIGQVYAGGLGPGTLVGSAAFDLFPIHAVCVVVPKAGELKKIADLGVWVVELFWSFWAYIWLYIILEVWTPNVVTLWEALLTVLMYGLLLTHAYAQDKRWPYISLPIARDERPEDWVPEETPCFKQEAHEKVECSEVIHVNKENGETVDIFSIHSGNPTETLYVRVPQTDDVTEISDKAMETTLGGTHLLKIWRQQFVDALRLESQESKKMNNVHLRIAQKFWQLLLLPWRFLFAFVPPCHIAHGWISFICSLLFISWIAYIVTMLTDLISCVTGINAYVIAFTALASGTSWPDLVASKIAAERQKTADSAIANITCSNSVNIYVGIGVPWLIDTLYNFIAYREPLRIQNAGGLSFSLIVFFSTSVGCISVLVIRRLVFGAELGGPRLWAWITCAFFMFLWIIFVVLSSLKVSGFI* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02139 528 PANTHER SODIUM/CALCIUM EXCHANGER 12 255 - -
Rops6g02139 528 Pfam Sodium/calcium exchanger protein 34 206 IPR004837 GO:0016020|GO:0055085
Rops6g02139 528 Pfam Sodium/calcium exchanger protein 357 520 IPR004837 GO:0016020|GO:0055085
Rops6g02139 528 Gene3D - 320 522 IPR044880 -
Rops6g02139 528 Gene3D - 86 221 IPR044880 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02139 5 528 Antiporters AT2G47600 71.509 0.0 761
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02139 K03452 K05849 gmx:100792839 932.169
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g02139 6 39690560 39697015 Rops6g02139 6 39690560 39697015 ECH