Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02112 ATGGCGGCATTGTCGTTTTCAGTGGCATCTGTGGTGGAGGATGTGCTTCAACAGCATGGCACTCGGTTCAAAGATCTTGATTTGGAATCTAGAAAAGCAGAAGAAGCTGCATTCAGAAGGTATGAAGCAGCCGGGTGGCTGAGAAAAATGGTTGGAGTTGTTGCAGCTAAAGATTTACCAGCAGAGCCCTCTGAGGAAGAGTTTAGGCTTGGTTTGAGAAGTGGGATCATTCTCTGTAATGTTCTTAACAAGGTTCAACCCGGTGCTGTACCCAAGGTTGTGGAGAGTCCTGTTGATTCTGCAGTAATCCCTGATGGAGCACCATTATCAGCATTTCAGTATTTTGAAAACGTGAGGAACTTTCTGGTGGCTGTCCAGGAAATTGGAATTCCTACCTTTGAGGCATCTGATCTTGAACAAGGAGGAAAATCAGCCAGGATTGTTAACAGTGTCTTGGCCCTTAAATCCTATAGTGAATGGAAACAAACTGGGGCCAATGGTGTGTGGAAATTCGGTGGAACTATCAAACCCTCAATATCTTCAAAATCTTTTGTGAGAAAAAACTCGGAGCCATTTACTAATTCCTTGTCAAGAAACTCGTCCATCAATGAAAAATCTCTGACTGCTCTTGCCTCTGACGTTGAGTCTAATAAAATGTCTGGTTCTTATTCTTTGGGTATGCTTGTTCGTGCAATACTATCAGATAAGAAGCCAGAAGAAGTTCCAATGTTGGTTGAATCTGTCTTGAATAAGGTTGTAGAGGAGTTTGAGCATCGCATTGCAAGCCAGGGCGAACAGACAAAAACAACTTCAAGAGGTGCTATGTCCCAAAGCAGTGGATCTATATCAAAGTTTGTCAAGGCAGAAAAAAAGGTGGATAATTCAATTCCCTTGGTAAGAAAGAAAGAGGAATTCATCCATAAAAACCGTGTTGCTGATGAGGAATCACAAAGACAACTTCTGAAGCAGCAAATGCTCTTTGATCAACAGCAAAGAGATATTCAAGAACTAAAGCATACAATTCAGACCACCAAATCTGGTATGCAGTTCATGCAAATGAAATTTCATGAGGAGTTCTCCAATCTAGGCATGCACATTCATGGCTTAGCTCATGCTGCTTCTGGATATCATAGAGTTCTTGAAGAAAATCGCAAACTATACAATCAAGTTCAGGATCTTAAGGGAAGTATAAGGGTGTACTGTCGAGTAAGACCCTTCTTATCTGGACAGCCAAATTATTTGAGCACAGTGGATAATATAGAAGATGGAACTATCACAATTAATATTCCTTCAAAGAATGGGAAAGGGCGTAGATCCTTCAACTTCAACAAAATCTTTGGACCATCTGCAGCACAAGCGGAGGTCTTCTCTGATATGCAGCCACTCATTAGGTCTGTTCTTGATGGATATAATGTATGCATATTTGCTTATGGCCAGACTGGATCAGGAAAAACTTACACTATGACCGGACCAAAAGAAATCACAGAGAAAAGCCAAGGTGTAAATTACAGGGCTCTAAGTGATTTGTTTCTTACAGCAGAGCAAAGAAAGGACACTTTTCAGTATGATGTGTCTGTTCAAATGATTGAAATTTATAATGAGCAAGTCAGAGATCTATTGGTTACCGATGGAACAAACAAAAGATTAGAAATTCGTAGTAATTCTCATAGAGGGCTCAGTGTACCGGATGCATGCCTTGTCCCAGTATCATCAACAAATGATGTTATCGAACTAATGAACCTGGGCCACAGGAACCGTGCAGTTGGAGCTACGGCTCTTAATGACCGTAGTAGCCGATCTCACAGTTGCTTGACTGTTCATGTTCAAGGAAGAGACTTGACATCTGGAGCTATCCTACGTGGATGCATGCATCTGGTTGACTTGGCAGGAAGTGAGAGGGTTGACAAATCTGAGGCCACAGGAGACAGACTGAAAGAGGCACAACATATTAACAAATCTCTTTCAGCTTTGGGTGATGTCATTGCTTCCCTTGCTCAGAAAAACCAACATGTACCCTACAGAAATAGCAAACTCACACAATTACTCCAAGATTCACTTGGAGGACAGGCCAAGACACTAATGTTTGTTCATATAAGTCCAGAGGTCGATGCCATTGGAGAAACAATTAGCACCTTAAAATTTGCAGAAAGAGTTGCTACAGTTGAACTTGGTGCTGCTCGAGTAAACAAGGATGGGGCAGATGTCAAAGAGCTCAAAGAACAGATTGCCAGCCTTAAGGCAGCATTGGCAAGAAAGGAAGGAGAATCAGAACATTCTTTATCTGGCAGCTCTGGAAAATATAGGACAATGGCTAATGAGCGGGGTGCAGATATTGTGGGTGACCTTGGGTGCCGGCAACCAATGGTTGATGTAGGCAACATAAAGCTTCACAGTAATACCACCCTGAGACAAAAAACTCAGAGCTTTGATTTTGATGAGATATCATCAAATTCACCACCCTGGCCCCCAGTGAAAAGTCCTGGACAAAACAGTGGGGAAGATGATAAAGAAACTGGTTCTGGAGAATGGGTTGATAAAGTCATGGTAAACAAACAAGATGTAAACAAAACTGACAACATCTTAGGGTGTTGGGAAGCAGATAATGAGCACTTATCCGAGGTCTTTTATCAAAAATATCTCCAAGATTCTTCCAAAGTATACTCAGAACGACCTTACAATATGTTTAACATGGGAGGCAACAAGTTTAACATTGCTGGTTCAGATGACATGGATGATCTTGATGCTGCAACCAGTGATTCCTCAGAACCTGACTTACTTTGGCAATTTAATCATTCAAAACTTACCAGCATAGCTAATGGAAATGGATCAAAGGCTAGGAGACCTGTCTCAAAGTCAGCAAAAAGCCCAGAATTGAGCAAGAATATTATTCATTCTTCTGTCGGTCCTTCACCTTCACGGAAACAATCAAATGGTGTCTCACATCGAACAGGAAGGCATCCAGCTCCAGTTGACATGAAACGTAAAACTGGGAATAGAAAGTAA 3003 0.4163 MAALSFSVASVVEDVLQQHGTRFKDLDLESRKAEEAAFRRYEAAGWLRKMVGVVAAKDLPAEPSEEEFRLGLRSGIILCNVLNKVQPGAVPKVVESPVDSAVIPDGAPLSAFQYFENVRNFLVAVQEIGIPTFEASDLEQGGKSARIVNSVLALKSYSEWKQTGANGVWKFGGTIKPSISSKSFVRKNSEPFTNSLSRNSSINEKSLTALASDVESNKMSGSYSLGMLVRAILSDKKPEEVPMLVESVLNKVVEEFEHRIASQGEQTKTTSRGAMSQSSGSISKFVKAEKKVDNSIPLVRKKEEFIHKNRVADEESQRQLLKQQMLFDQQQRDIQELKHTIQTTKSGMQFMQMKFHEEFSNLGMHIHGLAHAASGYHRVLEENRKLYNQVQDLKGSIRVYCRVRPFLSGQPNYLSTVDNIEDGTITINIPSKNGKGRRSFNFNKIFGPSAAQAEVFSDMQPLIRSVLDGYNVCIFAYGQTGSGKTYTMTGPKEITEKSQGVNYRALSDLFLTAEQRKDTFQYDVSVQMIEIYNEQVRDLLVTDGTNKRLEIRSNSHRGLSVPDACLVPVSSTNDVIELMNLGHRNRAVGATALNDRSSRSHSCLTVHVQGRDLTSGAILRGCMHLVDLAGSERVDKSEATGDRLKEAQHINKSLSALGDVIASLAQKNQHVPYRNSKLTQLLQDSLGGQAKTLMFVHISPEVDAIGETISTLKFAERVATVELGAARVNKDGADVKELKEQIASLKAALARKEGESEHSLSGSSGKYRTMANERGADIVGDLGCRQPMVDVGNIKLHSNTTLRQKTQSFDFDEISSNSPPWPPVKSPGQNSGEDDKETGSGEWVDKVMVNKQDVNKTDNILGCWEADNEHLSEVFYQKYLQDSSKVYSERPYNMFNMGGNKFNIAGSDDMDDLDAATSDSSEPDLLWQFNHSKLTSIANGNGSKARRPVSKSAKSPELSKNIIHSSVGPSPSRKQSNGVSHRTGRHPAPVDMKRKTGNRK* 1001
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02112 1000 Coils Coil 728 755 - -
Rops6g02112 1000 PANTHER KINESIN-LIKE PROTEIN KLP-3 44 948 IPR027640 GO:0003777|GO:0007018
Rops6g02112 1000 MobiDBLite consensus disorder prediction 937 982 - -
Rops6g02112 1000 Gene3D - 24 183 IPR036872 -
Rops6g02112 1000 MobiDBLite consensus disorder prediction 811 841 - -
Rops6g02112 1000 MobiDBLite consensus disorder prediction 986 1000 - -
Rops6g02112 1000 FunFam Kinesin-like protein KIN-14I isoform A 24 176 - -
Rops6g02112 1000 FunFam Kinesin-like protein KIN-14I isoform A 391 763 - -
Rops6g02112 1000 Pfam Kinesin motor domain 402 720 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops6g02112 1000 ProSiteProfiles Kinesin motor domain profile. 396 721 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops6g02112 1000 ProSiteProfiles Calponin homology (CH) domain profile. 37 159 IPR001715 GO:0005515
Rops6g02112 1000 MobiDBLite consensus disorder prediction 937 1000 - -
Rops6g02112 1000 SMART kinesin_4 394 729 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops6g02112 1000 PRINTS Kinesin heavy chain signature 671 692 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops6g02112 1000 PRINTS Kinesin heavy chain signature 622 640 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops6g02112 1000 PRINTS Kinesin heavy chain signature 591 608 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops6g02112 1000 PRINTS Kinesin heavy chain signature 469 490 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops6g02112 1000 Pfam Calponin homology (CH) domain 40 159 IPR001715 GO:0005515
Rops6g02112 1000 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 396 753 IPR027417 -
Rops6g02112 1000 CDD CH_AtKIN14-like 39 156 - -
Rops6g02112 1000 CDD KISc_C_terminal 394 723 - -
Rops6g02112 1000 SUPERFAMILY Calponin-homology domain, CH-domain 40 170 IPR036872 -
Rops6g02112 1000 SMART ch_5 39 157 IPR001715 GO:0005515
Rops6g02112 1000 Gene3D Kinesin motor domain 391 762 IPR036961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02112 Rops-Chr6 39373151 39379680 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02112 301 721 Calmodulin-binding Proteins AT5G65930 37.838 4.17e-79 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02112 K10406 - gmx:100801279 1732.61