Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02111 ATGCCTTCCGATTCCCATACCCCTAATCCATACCCTAAGGGTCTCCTCTGCAATGCTGGCGCTGGTGCTGCTGCTGGGGTTATTGCTGCTACATTTGTGTGTCCTTTAGATGTCATCAAAACAAGGTTTCAGGTTCATGGGCTGCCTCAGCTCGCTAATGGAAGTGTTAAAGGTAGTGTTATAGTTGGTAGTTTGGAACAAATATTTCACAAGGAGGGATTGCGTGGCATGTACCGTGGACTAGCCCCAACTGCATTGGCCTTACTTCCAAACTGGGCGGTCTATTTTACAATGTATGAGCAACTCAAGAGCCTGTTTTTTTCTGATGATGAAAGCCATCATCTTTCAATTGGAGCTAATATGGTAGCTGCTTCGGGTGCAGGAGCTGCAACTATTATGGTTACAAATCCACTATGGGTCGTCAAGACTAGATTCCAAACCCAGGGAATGAGACCTGGTGTTGTGCCATATAGGAGCACGCTATCTGCTTTGAAGAGAATTGCTCATGAGGAGGGCATTCGGGGGTTGTACAGTGGCCTTGTACCTGCTCTGGCTGGTATCAGTCATGTTGCCATCCAGTTTCCAACATATGAGAAAATAAAATTTTATCTGGCAAATAAAGATAACACAGCAATGGATAAGCTCAGTGCATGTGATGTTGCCATTGCCTCATCAGTCTCCAAAATTTTTGCATCCACATTGACATATCCTCATGAGGTTGTTCGTTCCAGAATGCAAGAACAAGGGCATCACTCAGAGAAGCGGTATTCTGGTGTGATCGACTGCATTAGAAAGGTATTTCAACTTGAGGGGCTTCCTGGTTTTTACCGTGGGTGTGCCACTAACCTCCTCAGGACAACCCCAGCTGCCGTAATCACATTCACTAGCTTTGAAATGATACACCGTTTTCTTGTCACTTTTCCCACCTGA 930 0.4548 MPSDSHTPNPYPKGLLCNAGAGAAAGVIAATFVCPLDVIKTRFQVHGLPQLANGSVKGSVIVGSLEQIFHKEGLRGMYRGLAPTALALLPNWAVYFTMYEQLKSLFFSDDESHHLSIGANMVAASGAGAATIMVTNPLWVVKTRFQTQGMRPGVVPYRSTLSALKRIAHEEGIRGLYSGLVPALAGISHVAIQFPTYEKIKFYLANKDNTAMDKLSACDVAIASSVSKIFASTLTYPHEVVRSRMQEQGHHSEKRYSGVIDCIRKVFQLEGLPGFYRGCATNLLRTTPAAVITFTSFEMIHRFLVTFPT* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02111 309 ProSiteProfiles Solute carrier (Solcar) repeat profile. 115 203 IPR018108 -
Rops6g02111 309 ProSiteProfiles Solute carrier (Solcar) repeat profile. 215 303 IPR018108 -
Rops6g02111 309 SUPERFAMILY Mitochondrial carrier 15 299 IPR023395 -
Rops6g02111 309 Gene3D Mitochondrial carrier domain 3 109 IPR023395 -
Rops6g02111 309 ProSiteProfiles Solute carrier (Solcar) repeat profile. 13 105 IPR018108 -
Rops6g02111 309 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 16 306 IPR044712 GO:0006862|GO:0055085
Rops6g02111 309 Pfam Mitochondrial carrier protein 15 108 IPR018108 -
Rops6g02111 309 Pfam Mitochondrial carrier protein 115 207 IPR018108 -
Rops6g02111 309 Pfam Mitochondrial carrier protein 217 305 IPR018108 -
Rops6g02111 309 PRINTS Mitochondrial carrier protein signature 130 148 IPR002067 GO:0055085
Rops6g02111 309 PRINTS Mitochondrial carrier protein signature 31 45 IPR002067 GO:0055085
Rops6g02111 309 PRINTS Mitochondrial carrier protein signature 18 31 IPR002067 GO:0055085
Rops6g02111 309 PRINTS Mitochondrial carrier protein signature 80 100 IPR002067 GO:0055085
Rops6g02111 309 PRINTS Mitochondrial carrier protein signature 224 246 IPR002067 GO:0055085
Rops6g02111 309 FunFam Nicotinamide adenine dinucleotide transporter 1, chloroplastic 2 111 - -
Rops6g02111 309 FunFam Mitochondrial nicotinamide adenine dinucleotide transporter 1 112 307 - -
Rops6g02111 309 Gene3D Mitochondrial carrier domain 110 306 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02111 Rops-Chr6 39352887 39360910 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02111 1 306 Chloroplast and Mitochondria Gene Families AT2G47490 76.797 6.30e-165 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02111 K15115 - jre:108994143 519.235