Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02075 ATGGTGTCCAAACCTACCGACTCTGCTCCCAAAATTCGAAAACAACATGGAGAGCCAGCAAATGATGCTGTTGGAACCTTGTCCTCCAAGATAAACCAGTTGGAAAAGCAAATACAGGCGGAGAGAATTGTGTCCATTAAAGAAAAACTTCAGAGGAATGAGAAGCAGCTACAATGTCATATTTCAGAAGTCATGTCAGCAATATCAACCAGGGACTCTTCACAGACCGAGGAAAATAGGACACAATCAATTCTTTCTTCAAGAATTGACCATCCTTTATGTAAATTTAGTGGTTTCTCTCAAGGTTCGGGAGACAAAGACCACAGCAATCAAGATGCATTATCTGCTACAAGTATTAAGATTCCATATATTGAAAGATTACCACCATATACATCTTGGATATTTTTGGACAGAAATCAGAGAATGGCTGAAGATCAGTCAGTTGTTGGAAGAAGACGTATCTACTATGATCAACATGGAAGTGAAGCACTGATATGTAGTGACAGTGAGGAAGAGTTAACAGAACCTGAGGAAGAAAAACATGAATTTTCTGAGGCTGAAGACCGTATTCTATGGATGGCATTTGAGGAACATGGATTAAATGAGGAGGTGTTGAATATTGTTAGCAAGTCTGTTGGGGGCACCAGTTTAGAAATTCAGGAGAGGTCTAAAAGTATCAAGGAAAATAATATCGGTAGGTCAGACCAGCATTCAGAAGGCTCAGGAGAATATGAATCTCCTATTGCCATATGTCCAGAGAAAAGCCTGAGTGCTGCATTAGATTCTTTTGATAACCTTTTCTGTCGCCGGTGCCTGCAGATTTTTGACTGTCGTCTACATGGCTGTTCTCAACCTTTAATATATCCCAGTGAAAAACAGACAGTTTGGTCTGAGCTTGAAGATGACAGGAAACCGTGCAGTGATCAGTGTTACCTTCAGTTAAAGGTTGTCAAAAGTTTGTCAGAAGATTCAACTCCTGGGTCTTTTCAGGATAAGAAAACTATAATTATAGAAGACGCAGATGAGATGTTGGCACCCTCCAGTGCAGAGGAACCTGTTAATCAGAGTACTACACTTCCAACCGAAGTTGATTGTCATGGATATCTCAATTTAAATGTTCCTGTCTCGGAAAATATGGGGAAGCGGAAGGTCACAAATCAATTAGACACAGCACTATGTGACTCATTGCCTCCCGATGATTCTCAGAATTCTTGTAAAAAAATGAAGATAATCTCAGATGATGTAATTACTGTAATTGGCGATGATAGCAAGAACCTAAATTCGGGTGCATGTGATGAAAGTAAACATATAATTACTTGTGCAAGTATGGACAAATCTGTTGAACTTAATTCAAATGAATTAATAGTTTCTTCTAGCACTTGCCATGGTGAGCAAAACCAAAGTGTTGGGGATGGACCAAAAGATGTCACCAATGAGACAGAATTTAAAAAGTTGTCAAATTCAATGGAAGGACAAGTTGATGGTATGCTAAGTCTCTCGGATTGGAAACCTCTAGAGAAAGAGTTATACTTGAAGGGAGTAGAAATGTTTGGCAGAAACAGTTGCCTCATAGCTAGGAATTTACTTTCTGGTTTGAAGACTTGCATGGAAATAGCTAGTTACATGCATGCTGGAGGAGTGTCAATGCCCCACAGATCTATTCTTGCACCTAGTTCAATCATGGACGACAAGGGAAATTTTGATGCTGAGTGCACAGACCAAGACATGCCGTCAAGGTCACGGTTACTGAGAAAAAGGGGCAAAACAAGGAAGTTTAAATATTCTTGGAAGTCTGCTGGCCACCCATCAATATGGAAAAGAATAGCTGATGGGAAAAACCAATCTTGCAAGCAGTATACACCATGTGGATGTCAGTCAATGTGTGGAAAGGAATGTTCTTGTGTTACTGGTGGAACTTGCTGCGAAAAATATTGTGGTTGTTCAAAGAGCTGTAAAAACCGGTTCAGAGGATGCCATTGTGCCAAGAGTCAATGCAGAAGTCGACAATGCCCGTGCTTTGCTGCTGGACGTGAATGTGACCCAGATGTCTGTCGAAATTGCTGGGTTAGTTGTGGGGATGGTTCGTTAGGGGAGCCACCTCGGCGCGGAGAAGGTCAATGCGGCAATATGAGGCTTCTTTTAAGGCAACAACAGAGGATTCTCTTGGCAAAGTCTGATGTTGCAGGATGGGGAGCCTTCTTGAAGAACCCTGTTAACAAAAATGATTACCTAGGAGAGTACACAGGTGAACTGATCTCCCACCGAGAAGCTGATAAGCGTGGGAAAATATATGATCGTGCGAATTCATCTTTCCTTTTTGACTTGAATGATCAGTACGTTCTTGATGCTTATCGCAAAGGAGACAAGTTGAAATTTGCGAACCATTCATCAAACCCCAACTGCTATGCAAAGGTAATGCTGGTTGCTGGAGATCACCGAGTAGGCATATTCGCGAAGGAACACATTGATGCTAGTGAGGAGCTCTTCTATGATTATCGCTATGGTCCAGATCAAGCACCCCCATGGGCTCGTAAACCTGAAGGTTCCAAGAGAGATGAGTATGCAGTTCCTCAAGGCAGAGCAAAGAAGCACCAGTCTCATTGA 2604 0.4171 MVSKPTDSAPKIRKQHGEPANDAVGTLSSKINQLEKQIQAERIVSIKEKLQRNEKQLQCHISEVMSAISTRDSSQTEENRTQSILSSRIDHPLCKFSGFSQGSGDKDHSNQDALSATSIKIPYIERLPPYTSWIFLDRNQRMAEDQSVVGRRRIYYDQHGSEALICSDSEEELTEPEEEKHEFSEAEDRILWMAFEEHGLNEEVLNIVSKSVGGTSLEIQERSKSIKENNIGRSDQHSEGSGEYESPIAICPEKSLSAALDSFDNLFCRRCLQIFDCRLHGCSQPLIYPSEKQTVWSELEDDRKPCSDQCYLQLKVVKSLSEDSTPGSFQDKKTIIIEDADEMLAPSSAEEPVNQSTTLPTEVDCHGYLNLNVPVSENMGKRKVTNQLDTALCDSLPPDDSQNSCKKMKIISDDVITVIGDDSKNLNSGACDESKHIITCASMDKSVELNSNELIVSSSTCHGEQNQSVGDGPKDVTNETEFKKLSNSMEGQVDGMLSLSDWKPLEKELYLKGVEMFGRNSCLIARNLLSGLKTCMEIASYMHAGGVSMPHRSILAPSSIMDDKGNFDAECTDQDMPSRSRLLRKRGKTRKFKYSWKSAGHPSIWKRIADGKNQSCKQYTPCGCQSMCGKECSCVTGGTCCEKYCGCSKSCKNRFRGCHCAKSQCRSRQCPCFAAGRECDPDVCRNCWVSCGDGSLGEPPRRGEGQCGNMRLLLRQQQRILLAKSDVAGWGAFLKNPVNKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLNDQYVLDAYRKGDKLKFANHSSNPNCYAKVMLVAGDHRVGIFAKEHIDASEELFYDYRYGPDQAPPWARKPEGSKRDEYAVPQGRAKKHQSH* 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02075 867 MobiDBLite consensus disorder prediction 838 867 - -
Rops6g02075 867 Pfam SET domain 729 832 IPR001214 GO:0005515
Rops6g02075 867 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 3 867 IPR025778 GO:0031519
Rops6g02075 867 SMART set_7 718 839 IPR001214 GO:0005515
Rops6g02075 867 MobiDBLite consensus disorder prediction 223 245 - -
Rops6g02075 867 MobiDBLite consensus disorder prediction 223 240 - -
Rops6g02075 867 FunFam Putative histone-lysine N-methyltransferase EZH2 619 835 - -
Rops6g02075 867 ProSiteProfiles CXC domain profile. 605 704 IPR026489 -
Rops6g02075 867 SMART CXC_2 653 690 IPR033467 -
Rops6g02075 867 Gene3D SET domain 619 835 IPR046341 -
Rops6g02075 867 Pfam CXC domain 657 688 IPR041355 -
Rops6g02075 867 MobiDBLite consensus disorder prediction 1 24 - -
Rops6g02075 867 ProSiteProfiles SET domain profile. 718 833 IPR001214 GO:0005515
Rops6g02075 867 CDD SET_EZH 718 834 - -
Rops6g02075 867 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 24 866 IPR045318 GO:0006338|GO:0042054
Rops6g02075 867 SUPERFAMILY SET domain 589 837 IPR046341 -
Rops6g02075 867 MobiDBLite consensus disorder prediction 844 860 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02075 Rops-Chr6 38823903 38834095 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02075 707 836 C2H2 Transcription Factor Family AT2G23740 26.531 3.89e-09 58.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Rops6g02075 SET 1e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02075 - - gmx:100808730 1513.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g02075 6 38823903 38834095 Rops6g02075 6 38823903 38834095 ECH
Rops8g03746 8 77891800 77904750 Rops6g02075 6 38823903 38834095 PCT