Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02069 ATGTCGCAGCTCATGGTTTCGTTCTCTCTAATCGGTGTGTTAGAAAAGGTTCAATGCATGTTGCTGAAGAAAACGTTGCTTGTATTATTATTATTATTGTCTAGCATGGTGTTTATGGTTGATTGTGGTACACATCTGGAATCACCTTCATTATCTCCAGCTACACTACCATCAAATGTTCATGGGTGGAAGCATTTGCTATTCACTAGAAGGAGGAGTGATTTAGGATCTCCAGTTTCTGGCTTTAAAACTATTGCCCCTATGTATTCCATTGCAGATGCAATTCCCTCTGCTATGCCTCAACCCCCATTGTCCCCTTCTGTTTCCAATTGTTGTTCACAAGACATGGTGTTGAAACGAGGCAGCAAGAATTGCCACTGTGTTTATCCCATAAAGTTAGACCTTGTTCTTTTGAATGTCTCTCAAAACCCCGCCGGGAATGTTTTTCTTGATGAATTGGCTACCCAACTTGGGCTGCAGACTACCCAAATTGAACTGATCAACTTTTATGTACTCAACTTATCGACGTTGAACATATCAATGGATATCACTCCGCATAAAGGGATCAGTTTCTCTGCCAATGAAGCATCTAAAATTAACTCTTCGCTTTTACTGCATAAGATTCAATTAGACCAAAGGTTCGTGGGTGACTACAGAGTTCTCAATATAACCTGGTTTAAACCTCCACCTCCTTCGCAAGCTCCTACTTTTGCTGCATCACCTATGAAATCTCCTCAGAGACAAGCACCTACAACCACATCATCGCGTACTTCAGTCAGGGGAAGACATCCAAATTTGCTTCTTATTCTTGGAATTGTCACTGGCATACTCTTCATTTCCATTGTATGTGTAGTTATTCTTTGTTTATGCATGTTGCGGCCGAAAACTAAAACACCTCCCACAGAAACTGAAAAGCCAAGGATGGAAAGTGCAGTTTCAGCTGTTGGGTCTCTTCCCCACCCAACCAGTACACGCTTTATCACTTATGAAGAACTTAAAGAAGCAACAAACAATTTTGAAACTGCAAGCGTACTTGGAGAAGGAGGTTTTGGTAGAGTTTTTAAAGGTGTCTTGAATGATGGAACTGCTGTTGCAATTAAAAGGCTTACTAGTGGAGGGCAACAGGGTGACAAAGAGTTTTTGGTTGAGGTTGAGATGCTTAGCCGGTTGCATCATCGTAACCTTGTAAAACTAGTGGGATACTACAGCAATCGTGACTCATCACAAAATCTACTTTGCTATGAGCTTGTCCCGAATGGAAGTTTGGAGGCCTGGCTTCATGGTCCTTCGGGAATAAATTGCCCTTTGGATTGGGACACCAGAATGAAGATAGCGCTTGATGCTGCAAGAGGACTTGCATACCTGCATGAAGATTCACAGCCCAGTGTTATACACAGAGATTTCAAGGCATCCAACATATTGCTTGAGAACAACTTCCATGCTAAAGTTGCAGATTTTGGTCTTGCTAAACAGGCACCTGAAGGCAGAGCCAATTACCTGTCTACTCGGGTAATGGGCACATTTGGGTATGTAGCACCTGAGTATGCTATGACTGGACACCTACTTGTTAAAAGTGATGTCTATAGCTATGGGGTTGTCTTACTGGAATTGTTAACTGGAAGGAAACCTGTGGATATGTCTCAGCCAACAGGACAAGAGAACCTTGTCACTTGGGCAAGGCCAATTCTTAGAGATAAGGACCGGTTGGAAGAACTTGCTGATCCAAGGCTTGGGGGAAGGTACCCGAAGGAAGATTTTGTCCGTGTTTGCACTATTGCTGCAGCCTGTGTTGCTCCTGAAGCAAGCCAACGACCTACAATGGGTGAAGTGGTACAGTCACTCAAAATGGTGCAGCGCATCACAGAAAATCATGATCCCACGTTAGCTTCATCCAATACACGACCACCCAACATTAGACAATCATCTACCACTTATGAGTCTGATGGGACATCTTCAATGTTTTCTTCTGGTCCTTACTCAAGTGCCTTTGACTATGACAACCTTTCCAAGACTGCTGTTTTTTCTGAAGATCTTCATGAAGGACGATGA 2049 0.4295 MSQLMVSFSLIGVLEKVQCMLLKKTLLVLLLLLSSMVFMVDCGTHLESPSLSPATLPSNVHGWKHLLFTRRRSDLGSPVSGFKTIAPMYSIADAIPSAMPQPPLSPSVSNCCSQDMVLKRGSKNCHCVYPIKLDLVLLNVSQNPAGNVFLDELATQLGLQTTQIELINFYVLNLSTLNISMDITPHKGISFSANEASKINSSLLLHKIQLDQRFVGDYRVLNITWFKPPPPSQAPTFAASPMKSPQRQAPTTTSSRTSVRGRHPNLLLILGIVTGILFISIVCVVILCLCMLRPKTKTPPTETEKPRMESAVSAVGSLPHPTSTRFITYEELKEATNNFETASVLGEGGFGRVFKGVLNDGTAVAIKRLTSGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSNRDSSQNLLCYELVPNGSLEAWLHGPSGINCPLDWDTRMKIALDAARGLAYLHEDSQPSVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRANYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPTGQENLVTWARPILRDKDRLEELADPRLGGRYPKEDFVRVCTIAAACVAPEASQRPTMGEVVQSLKMVQRITENHDPTLASSNTRPPNIRQSSTTYESDGTSSMFSSGPYSSAFDYDNLSKTAVFSEDLHEGR* 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02069 682 SUPERFAMILY Protein kinase-like (PK-like) 315 616 IPR011009 -
Rops6g02069 682 ProSitePatterns Serine/Threonine protein kinases active-site signature. 463 475 IPR008271 GO:0004672|GO:0006468
Rops6g02069 682 Pfam Protein tyrosine and serine/threonine kinase 341 614 IPR001245 GO:0004672|GO:0006468
Rops6g02069 682 ProSiteProfiles Protein kinase domain profile. 339 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g02069 682 MobiDBLite consensus disorder prediction 233 259 - -
Rops6g02069 682 FunFam Receptor-like serine/threonine-protein kinase ALE2 319 416 - -
Rops6g02069 682 PANTHER OS01G0750732 PROTEIN 107 633 - -
Rops6g02069 682 MobiDBLite consensus disorder prediction 624 653 - -
Rops6g02069 682 ProSitePatterns Protein kinases ATP-binding region signature. 345 367 IPR017441 GO:0005524
Rops6g02069 682 Gene3D Transferase(Phosphotransferase) domain 1 417 634 - -
Rops6g02069 682 MobiDBLite consensus disorder prediction 297 317 - -
Rops6g02069 682 MobiDBLite consensus disorder prediction 237 259 - -
Rops6g02069 682 Gene3D Phosphorylase Kinase; domain 1 302 416 - -
Rops6g02069 682 FunFam Receptor-like serine/threonine-protein kinase ALE2 417 633 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02069 Rops-Chr6 38795605 38801340 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02069 77 682 Receptor kinase-like Gene Family AT4G02010 74.384 0.0 945
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Rops6g02069 PK_Tyr_Ser-Thr 8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02069 - - gmx:100792818 1091.26