Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02064 ATGGAGAAGAAAGAGATAGTTGTGAAGACTGAGGATGCGGTTGGTTCCTCTTCCTTCCCTGGTTATAATTCAAACGGTTATCCATTCTCTAACGTGTTTGATTTCTCTGAGTCTGAAAAGAGCTCTTTAGGGTTTATGGAGTTACTGGGTGTGCAGGACTATAATAGTCCTCTGCTTGATTTACAACAACTATCAACTATGTCTGTGCCTCATCACCCTACTGTTAAGGTTCCATCTGACACTGTGAAAGAGTGTTCTGAGGTCTTGAACCAGCAACCAGCCACTCCCAACTCTTCTTCGATTTCATCAGCGTCCAGTGAGGCTGTTAATGATGAACAGAATAAGATTGTTGATCAAGCAGAAGAAGAAGAAGAAGAAGAAGAACAGCAAAAGACCAAGAAACAGTTGAAGGCCAAGAAGACAAATCAGAAGAGACAGAGAGAACCAAGATTCGCGTTCATGACTAAAAGTGAGGTCGATCATCTGGAAGATGGATACAGATGGAGAAAGTACGGTCAAAAGGCTGTGAAAAATAGCCCCTTTCCCAGGAGCTATTATCGTTGCACCAGTGCTCCATGTAATGTGAAGAAACGCGTGGAGCGATCTTTCACTGATCCAAGCATTGTAGTGACAACCTATGAAGGCCAACACACACATCCAAGCCCAGTTATGCCCCGTTCAGGCCTCGCCGGAGCTCCGATAAGGCCAGGTGTCTCCGCCACCAACTTTGGTTCAGTTCTGCCAGGGAACTACTTATCCCAGTATCAGCACCACCACCGTCAACTACTCCTTATGAACACGTTGTCCTCTTTGGGTTTCCCTTACGGTGATTCTTCATCTTCAAAAAACGCCGTTTTTACTCAAGAGAAACAACAACTATGTAATCCAGGGACGACTGCATTTCTAGGGAACCATGGGCTTCTTCAAGATGTTGTTCCTTCACATATGTTGAAAGAAGAGTAG 963 0.4465 MEKKEIVVKTEDAVGSSSFPGYNSNGYPFSNVFDFSESEKSSLGFMELLGVQDYNSPLLDLQQLSTMSVPHHPTVKVPSDTVKECSEVLNQQPATPNSSSISSASSEAVNDEQNKIVDQAEEEEEEEEQQKTKKQLKAKKTNQKRQREPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTSAPCNVKKRVERSFTDPSIVVTTYEGQHTHPSPVMPRSGLAGAPIRPGVSATNFGSVLPGNYLSQYQHHHRQLLLMNTLSSLGFPYGDSSSSKNAVFTQEKQQLCNPGTTAFLGNHGLLQDVVPSHMLKEE* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02064 320 ProSiteProfiles WRKY domain profile. 157 222 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops6g02064 320 SMART WRKY_cls 162 221 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops6g02064 320 Pfam WRKY DNA -binding domain 163 220 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops6g02064 320 PIRSF WRKY_txn_fact_IIc 1 320 IPR017396 GO:0003700
Rops6g02064 320 FunFam WRKY transcription factor 57 148 222 - -
Rops6g02064 320 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 90 253 IPR044810 GO:0003700
Rops6g02064 320 MobiDBLite consensus disorder prediction 89 113 - -
Rops6g02064 320 Gene3D WRKY domain 147 223 IPR036576 GO:0003700|GO:0006355|GO:0043565
Rops6g02064 320 Coils Coil 106 146 - -
Rops6g02064 320 MobiDBLite consensus disorder prediction 89 149 - -
Rops6g02064 320 SUPERFAMILY WRKY DNA-binding domain 154 222 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02064 Rops-Chr6 38739192 38741130 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02064 27 320 WRKY Transcription Factor Family AT2G47260 48.083 1.41e-69 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Rops6g02064 WRKY 2.1e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02064 - - aprc:113872234 483.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g02064 6 38739192 38741130 Rops6g02064 6 38739192 38741130 ECH
Rops8g03758 8 78125150 78126954 Rops6g02064 6 38739192 38741130 PCT