Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02041 ATGGGTAGAACTCTACACATGCATGCAGTGCTCTCCAGCTTGATTCTAATTCTTTCAGTTTCGTCATCAGCATCTTTGAAGGTGGGTTTCTATAAAACTAGATGTCCATCAGCTGAGGCAATAGTAAGAAGAGCTGTAAACAAAGCCGTGTCACTTAACCCTGGCATCGCTGCTGGCTTGATTAGAACGCATTTTCATGATTGTTTTGTAAGGGGCTGTGATGGTTCTGTGTTATTAGAATCAACACCAGGTAATAACCCATCTGAGAGAGACCACCCTGCAAACAATCCAAGCTTACGTGGCTTCGAGGTGATCGATGAAGCCAAGGCACAAATAGAGGCTGAATGTCCTCAAACGGTGTCGTGTGCAGACATCATTGCTTTTGCTGCTCGAGATAGTGCTCGCAAAGTTGGGGGCATAAACTACATGGTACCAGCAGGACGCAGAGATGGTCGAATCTCTATAAGCGACGAAGTGACACAAAATTTGCCACCACCAAGTTTCAAAGCTGAGGAACTCATTAGTAATTTTGCAAGAAAAGGATTGTCAGTTGATGAAATGGTGACACTTTCTGGAGCTCACTCAATTGGAGTATCACGTTGTTCTTCCTTCTCTGACCGCTTATACTCTTTCAATGCCACCACTACTCAAGATCCCTCTATGGACCCTAAGTTTGCTGCATTCTTGAAATCCAAGTGCCCTCCACGGAGCAGTGGTGACCAAACAGTGGTGCTTGAGGTTTCCACGCCTAACCGTTTGGACAACAAGTACTATACGGGGCTGAAGAACAGTCGTGGTTTGTTGACCTCGGATCAGACTTTGCTGAGTAGCCGTTCAACAAGACAAATGGTGTTAAGCAATGCCAAACATGGTTCAAGATGGGCACTGAAGTTTGCCAAGGCAATGGTGCACATGGGTTCCATAGATGTGCTAACAGGCTCACAAGGTGAGATTAGGAGGCGTTGCAGCGTCGTTAATTGA 981 0.4577 MGRTLHMHAVLSSLILILSVSSSASLKVGFYKTRCPSAEAIVRRAVNKAVSLNPGIAAGLIRTHFHDCFVRGCDGSVLLESTPGNNPSERDHPANNPSLRGFEVIDEAKAQIEAECPQTVSCADIIAFAARDSARKVGGINYMVPAGRRDGRISISDEVTQNLPPPSFKAEELISNFARKGLSVDEMVTLSGAHSIGVSRCSSFSDRLYSFNATTTQDPSMDPKFAAFLKSKCPPRSSGDQTVVLEVSTPNRLDNKYYTGLKNSRGLLTSDQTLLSSRSTRQMVLSNAKHGSRWALKFAKAMVHMGSIDVLTGSQGEIRRRCSVVN* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02041 326 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
Rops6g02041 326 Gene3D - 29 326 - -
Rops6g02041 326 FunFam Peroxidase 29 172 - -
Rops6g02041 326 SUPERFAMILY Heme-dependent peroxidases 26 326 IPR010255 GO:0004601|GO:0006979|GO:0020037
Rops6g02041 326 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops6g02041 326 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops6g02041 326 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops6g02041 326 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops6g02041 326 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops6g02041 326 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops6g02041 326 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops6g02041 326 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops6g02041 326 PRINTS Plant peroxidase signature 300 313 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops6g02041 326 PANTHER PEROXIDASE 25-RELATED 17 319 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops6g02041 326 CDD secretory_peroxidase 26 325 IPR033905 GO:0004601|GO:0042744
Rops6g02041 326 Gene3D Peroxidase, domain 2 164 305 - -
Rops6g02041 326 ProSiteProfiles Plant heme peroxidase family profile. 25 326 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops6g02041 326 FunFam Peroxidase 164 305 - -
Rops6g02041 326 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops6g02041 326 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops6g02041 326 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops6g02041 326 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops6g02041 326 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops6g02041 326 Pfam Peroxidase 42 288 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02041 Rops-Chr6 38383744 38384834 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02041 24 326 Peroxidase AT1G05260 48.039 1.53e-90 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02041 K00430 - gmx:100815158 492.271