Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02034 ATGAAAAGCAAAATAGTTGCCTCTGCGGTTTCTCTCATTCTGGTGGTGGGTGTTGTCATCGGTACCGTTGCTATTGTCCAAAACCAGAAAGGCAATAACAACACTAAGGGTGGAGAATTGAATACCCACACCAAGGCCGTGACAACCTTGTGCCAAAACACAGACGACAAGAAACTTTGCCATGATGTCCTCAACCCTGTCAACACCACAGACCCAAAGGATTACATTGCCACCGTGGTGAAAACCTCCATGGACAGCGTCATCAAAGCATTCAACATGAGCGACAGGCTCACAGTGGAGCATGGAGATAAAAGCCCCGGCATGAAGATGGCCCTGGAAGATTGCAAGGACTTGCTGCAATCTGCCATTCAGGAACTCGATGCCTCAGGTGTTTTGGTTAGTCAAAGCAACATTAATGACATCAGTGGCAAAGAAGCAGAACTTAAGAACTGGTTGGGTGCTGTCATTGCCTACCAACAATCTTGCCTTGATGGGTTCAACACAGAAGGTGAGAAAGAGGTTCAGACACAGTTGCAAACAGATAGCTTGGACAACGTTGGAAAACTCACTGGGTTGGCACTTGATGTCGTGGCTGGAGTCTCCAAGATTCTTTCTGCCTTTGATTTGAATTTGAATCTGAAACCTGCCTCTCGTCGCCTTCTTGAGGTTGATCATGAGGGTTACCCAACTTGGTTTTCCGCTTCTGATCGTAAGATCTTGAAAGAGATCAACAATGGAGGCCAAGGTGGAGTTCTACCCAATGCAATTGTGGCCAAGGATGGTAGTGGCCAATTTAAGACCATTACCGATGCTATCAACTCCTACCCCAAAAACCACCAAGGCAGGTTCCTCATCTACGTGAAGGCTGGTATCTATGATGAGTACATTATCGTTGACAAGAAGAAGCCAAACATTCTCTTGTACGGTGATGGCCCAACAAAGACCATTATCACAGGACGCAAGAACTTCGCCGAAGGTGTCAAGACAATGAGAACCGCCACCTTCTCTACTGTTGCTGAGGATTTCATTGCCAAGTCAATTGCATTCGAGAACACTGCTGGTCCTGAAGGTCACCAAGCAGTGGCACTTCGTGTACAAGGTGATCGCTCTGCATTCTTTGATTGCGCATTGCGTGGTTTCCAAGACACATTGTATGCTCACGCTCACCGTCAATTCTACCGCAACTGTGAGATCTCTGGAACCATTGATTTCATTTTTGGGTATGGCACCACCTTGATTCAGAACTCCAAGATCATTGTGAGGAGGCCTGGTCCAAATCAACAGAACATAGTGGTGGCTGATGGCACAGACCAAAAGAGCATGCCCACTGGAATAGTCCTCCAGGGTTGTGAGATCATGCCAGAGGCAGGACTCTCTGCTGACAGGTTGACAGTGAAGTCTTACTTGGCTAGGCCATGGAAGGCATTCTCAAGGGCAGTGTTCATTGAAAATGTTATTGGTGATTTGATTCAGCCAGAAGGGTATATTCCATGGAACCCTATTGAACCAAACACTCAAAATGCTTACTTTGTTGAGTTTGGCAACACTGGACCAGGTTCCAATGCTCAAGCAAGGGCTCAATGGGCCAAAGGTCTCATCAGCAAGGAAGAGGCTTCTCAATACACCGCTGAACCATGGCTCCAAGCTAGCACTTGGTTGCCAGCCACTGGCATTCCTTTCGATACTACTTTCACCAAGGCTTAA 1704 0.4707 MKSKIVASAVSLILVVGVVIGTVAIVQNQKGNNNTKGGELNTHTKAVTTLCQNTDDKKLCHDVLNPVNTTDPKDYIATVVKTSMDSVIKAFNMSDRLTVEHGDKSPGMKMALEDCKDLLQSAIQELDASGVLVSQSNINDISGKEAELKNWLGAVIAYQQSCLDGFNTEGEKEVQTQLQTDSLDNVGKLTGLALDVVAGVSKILSAFDLNLNLKPASRRLLEVDHEGYPTWFSASDRKILKEINNGGQGGVLPNAIVAKDGSGQFKTITDAINSYPKNHQGRFLIYVKAGIYDEYIIVDKKKPNILLYGDGPTKTIITGRKNFAEGVKTMRTATFSTVAEDFIAKSIAFENTAGPEGHQAVALRVQGDRSAFFDCALRGFQDTLYAHAHRQFYRNCEISGTIDFIFGYGTTLIQNSKIIVRRPGPNQQNIVVADGTDQKSMPTGIVLQGCEIMPEAGLSADRLTVKSYLARPWKAFSRAVFIENVIGDLIQPEGYIPWNPIEPNTQNAYFVEFGNTGPGSNAQARAQWAKGLISKEEASQYTAEPWLQASTWLPATGIPFDTTFTKA* 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02034 567 Pfam Pectinesterase 254 549 IPR000070 GO:0030599|GO:0042545
Rops6g02034 567 Pfam Plant invertase/pectin methylesterase inhibitor 46 195 IPR006501 GO:0004857
Rops6g02034 567 ProSitePatterns Pectinesterase signature 2. 398 407 IPR033131 -
Rops6g02034 567 SMART PMEI_2 42 196 IPR006501 GO:0004857
Rops6g02034 567 FunFam Pectinesterase 43 201 - -
Rops6g02034 567 NCBIfam pectinesterase inhibitor domain 35 195 IPR006501 GO:0004857
Rops6g02034 567 SUPERFAMILY Pectin lyase-like 254 562 IPR011050 -
Rops6g02034 567 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 45 197 IPR035513 -
Rops6g02034 567 Gene3D Invertase/pectin methylesterase inhibitor family protein 42 200 IPR035513 -
Rops6g02034 567 Gene3D - 250 564 IPR012334 -
Rops6g02034 567 CDD PMEI-like_3 49 202 - -
Rops6g02034 567 PANTHER PECTINESTERASE 15 554 - -
Rops6g02034 567 FunFam Pectinesterase 248 564 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02034 Rops-Chr6 38306187 38315391 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02034 4 559 Carbohydrate Esterase AT3G62170 39.353 3.46e-137 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02034 K01051 - gmx:100808559 895.19