LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Rops6g02014	ATGGGACATGTAATTGGTGTTGCCATGGTAACTTTTGCTGTTTTGATAATATCAAAGATTTGGAAAATCTGTACTATTATCTTTTGGAGGCCATACGCCTTGACTAGGCACTTTCGAAAGCAAGGAGTCATGGGGCCACCTTACTCCTTTGTTTCTGGTTCTCTCCATGAAATCAAAACAATGATTAAGGATGCAAGGGAAAGGGTCATGGATGTTCACTCAAATGAAATCACTCCAAGGGTTCTTCCTCACTACCAAAAATGGTCCTCTTTATATGGGGAGACATTTTTGTATTGGTATGAAACACAACCGAGGGTTTGCATCAGTGATCCTGAGCTGGCCAAGGAGATTTTATCAAACAAGTTTGGTTTCTATGCAAAACCCAAGATAAGGCCTTCTATAAAAACCATGCTAGGAGATGGGTTAGTTCTGGTCAATGGGCTGGAATGGGTTAAACGAAGAAGGATACTCAATCCGGCCTTCTCCATGGATAAACTCAAGGTTATGATCAGTAGGATAGCAGCATGTACCATTTCCATGCTTGATAAGTGGAAAAATCAAGCCATTGAAGACAAGCACAATGTCAATACAATAGAGATGAGTGAAGAATTTCGAGAGCTCACAGCAGATATAATCGCCCACACTGCCTTTGGTAGCAGCTTTGTCCAAGGAAGAGAGGCCTTTGATGCACAAACACTACTTCATAAATATTGCGTAGCTTCAAGTGTTGACATTTTCATTCCTGGCACCCAATATCTTCCTACTAAGTCAAATTTTCTGATTTGGAAGCTTGATAGAAAATTGAAGAAATCACTACAGTACATTATGGAAAGCAGATTGCATTCTCAATCAAGTAGTGACTCATCTTATGGAGATGATCTGCTGGGTGTAATGATGGATACAGAGAAAACAAATACTGGTCTTAAGTTGAAGATGAACGAAATCATAGAAGAATGCAAGACCTTTTTCTTTGCTGGTCATGAAACCACTTCAAACTTGCTTACTTGGACTGTCTTCTTGTTGAGTTTACACAAAGAATGGCAAGAGAAACTCAGACAAGAGGTCTTGCAGAACTGTGGCATGGAAATTCCTGATGCAGATATGCTATCAAAGTTAAAATTGGTGAATATGGTATTGCTGGAAGCGTTAAGGTTATATTGCCCCGTGATAGAACTACAAAGAGTGGCTTCACAAGACATGAAATTGGGAAATTTGTTGATCCCAAAAGACACATGTCTCACTATCCCAGTTACAATGATGCACAGGAGCAAAGAATACTGGGGTGAAGATGCAAATGAGTTCAACCCTATGAGATTCATAAATGGAGTTTCTAAGGCTGCAAAGCACCCAAATGCTCTACTTGCCTTTTCGGTGGGTCCAAGAAGTTGCATTGGTCAGAATTTTGCTATGCTTGAAGCGAAGACAGTAATGGCTTTAATTCTTCAAAGGTTTTCTTGGTCCCTTTCCCCTGACTATAAACATGCACCTGTAAACAACCTCACTTTGCATCCCCAACATGGCCTTCCCATCATCGTGAAACCTTTGCAATTGTAA	1554	0.4028	MGHVIGVAMVTFAVLIISKIWKICTIIFWRPYALTRHFRKQGVMGPPYSFVSGSLHEIKTMIKDARERVMDVHSNEITPRVLPHYQKWSSLYGETFLYWYETQPRVCISDPELAKEILSNKFGFYAKPKIRPSIKTMLGDGLVLVNGLEWVKRRRILNPAFSMDKLKVMISRIAACTISMLDKWKNQAIEDKHNVNTIEMSEEFRELTADIIAHTAFGSSFVQGREAFDAQTLLHKYCVASSVDIFIPGTQYLPTKSNFLIWKLDRKLKKSLQYIMESRLHSQSSSDSSYGDDLLGVMMDTEKTNTGLKLKMNEIIEECKTFFFAGHETTSNLLTWTVFLLSLHKEWQEKLRQEVLQNCGMEIPDADMLSKLKLVNMVLLEALRLYCPVIELQRVASQDMKLGNLLIPKDTCLTIPVTMMHRSKEYWGEDANEFNPMRFINGVSKAAKHPNALLAFSVGPRSCIGQNFAMLEAKTVMALILQRFSWSLSPDYKHAPVNNLTLHPQHGLPIIVKPLQL*	518

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Rops6g02014	517	FunFam	Cytochrome P450 734A1	28	516	-	-
	Rops6g02014	517	SUPERFAMILY	Cytochrome P450	78	514	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Rops6g02014	517	PRINTS	P450 superfamily signature	377	388	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Rops6g02014	517	PRINTS	P450 superfamily signature	454	463	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Rops6g02014	517	PRINTS	P450 superfamily signature	325	342	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Rops6g02014	517	PRINTS	P450 superfamily signature	463	474	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Rops6g02014	517	PRINTS	E-class P450 group I signature	89	108	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Rops6g02014	517	PRINTS	E-class P450 group I signature	453	463	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Rops6g02014	517	PRINTS	E-class P450 group I signature	463	486	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Rops6g02014	517	PRINTS	E-class P450 group I signature	334	360	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Rops6g02014	Rops-Chr6	38014309	38018256	Dispersed/Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Rops6g02014	21	516	Cytochrome P450	AT2G46960	54.980	0.0	578

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Rops6g02014	K20660		-	aprc:113872106	848.195

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