Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02011 ATGACAATGAAGCTGATTTTGTTGGCTGTTGAATTTGCATGCTTTGTTTCTGGGATTGTCTCCACCGGATCTGACACATTCTCTCTGCTTTCTTTCTTAGAAAATAATGCTATCTCACCTACGCCTTTCTCCTCTCCACAACCTCTTATGATCAACCTCACTCTTATTGAAGGAGCTGATTCTAAAGGAGCTGTCTGTTTGGATGGAACATTACCTGGTTATCATTTGGATCGTGGATTTGAATCTGGTGCAAATAGTTGGCTTATTCATTTGGAGGGAGGAGGATGGTGTAATACAGTCAGAAACTGTGTCTATAGAAAAAATACTCGTCGTGGTTCCTCAAAATACATGGAAAATCAAATACCATTCACAGGAATATTGAGCAATAAAGCTGAAGACAACCCTGATTTCTTTAACTGGAACAGAGTCAAATTACGGTACTGTGATGGAGCGTCTTTCAGTGGAGATAGTGAAAATCAGGCTGCACAGCTTCAATTTCGAGGACAGAAAATATGGATAGCTGCAATGGAGGAATTAATGTCCAAAGGAATGCAGAATGCCAACCAGGCCCTTCTCTCTGGATGCTCTGCGGGTGGTTTGGCATCCATAATACATTGTGATGAGTTCCAGAGCTTGTTTCCAAAATCTTCCAAAGTGAAATGTTTGAGTGATGCAGGATATTTTCTTGATGCAATTGATGTATCCGGGGGACGTACACTGAGGAATCTGTTTGGAGGTGTAGTTCAGTTACAGGAAGTACAAAAAAATCTGCCAAAAAGCTGTCTCAACCAACTAGACCCAACTTCGTGTTTCTTTCCTCAGAATGTGGTCCAACATGTTGAGACCCCATTATTTCTACTCAATGCAGCTTATGATGCGTGGCAGGTCCAAGCCAGTTTAGCCCCACCGTCAGCTGACCCCCTTGGCTCTTGGACTGACTGCAAATCAAACCATGCAAATTGTAACTCATCTCAAATTCAGTTCCTCCAAGACTTCAGAAATCAAATGCTAAATGATGTGAAAGACTTCTCAAGTTCATCTCAAACTGGACTATTCATAAATTCTTGTTTTGCTCATTGCCAGTCTGAGAGACAGGAGACATGGTTCGCCGATGACTCTCCCCTTATTGGAGACAAGCCAATTGCAGTTGCTGTTGGAGACTGGTATTTTGATCGAGAAGTTGTCAAAGCTATTGACTGTGCTTACCCTTGTGACAACAGCTGCCATAATCTGATATTCAAGTGA 1245 0.4201 MTMKLILLAVEFACFVSGIVSTGSDTFSLLSFLENNAISPTPFSSPQPLMINLTLIEGADSKGAVCLDGTLPGYHLDRGFESGANSWLIHLEGGGWCNTVRNCVYRKNTRRGSSKYMENQIPFTGILSNKAEDNPDFFNWNRVKLRYCDGASFSGDSENQAAQLQFRGQKIWIAAMEELMSKGMQNANQALLSGCSAGGLASIIHCDEFQSLFPKSSKVKCLSDAGYFLDAIDVSGGRTLRNLFGGVVQLQEVQKNLPKSCLNQLDPTSCFFPQNVVQHVETPLFLLNAAYDAWQVQASLAPPSADPLGSWTDCKSNHANCNSSQIQFLQDFRNQMLNDVKDFSSSSQTGLFINSCFAHCQSERQETWFADDSPLIGDKPIAVAVGDWYFDREVVKAIDCAYPCDNSCHNLIFK* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02011 414 PANTHER NOTUM-RELATED 33 410 IPR004963 GO:0016787
Rops6g02011 414 Pfam Pectinacetylesterase 46 394 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02011 Rops-Chr6 37944273 37949454 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02011 6 413 Carbohydrate Esterase AT3G62060 67.146 0.0 589
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02011 K19882 - gmx:100786972 758.059
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03859 8 79427869 79432583 Rops6g02011 6 37944273 37949454 ECH
Rops6g02011 6 37944273 37949454 Rops8g03859 8 79427869 79432583 ECH
Rops6g02011 6 37944273 37949454 Rops6g02011 6 37944273 37949454 ECH
Rops2g05064 2 90802624 90810157 Rops6g02011 6 37944273 37949454 ECH
Rops8g03838 8 79182109 79188064 Rops6g02011 6 37944273 37949454 PCT