Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02006 ATGGGTAACGGCACTTCTCGTGTTGTTGGCTGTTTGGTGCCATTCAATGGCAAAAGTGGGGTTGATTTGGAGCTTTTAGAGCCATTAGATGAAGGGTTAGGCCATTCCTTCTGTTATGTTAGGCCATCCATTTTTGAATCTCCTGCCATTAGCCCATCAAACTCTGAGAGGTTTACAGTTGATTCCAGTACCCTTGATTCTGAAACCTTGAGTGGATCCTTTAGGCATTTTAGCATGGAAGATTCTTCTGGCTTACACAAGCCGGGTAAGAATTTCCCAGAAACTACATTCAAAACAATTTCCGGGGCTTCTGTCAGTGCCAATGTTTCGACTGCGAGGACTGGTAATCAGAGTGCATTGTTTACTAGTGATGTCCTGGAACCTGCTGCATCATTTGAGGGAACTGCTTCATTTGCTGCAATCCCTCTGCAGCCTGTTCCACGAGGTTCTGAACCTTTGAATCGTTTCATGTCTGGACCTCTCGAGAGAGGTTATGCCTCAGGTCCATTGGATAAGGGTGTTGGTTTCATGTCTGGGCCGATGGAGAAGGGGGTTATGTCAGGTCCTCTTGATGCCACTGACAAATCCAATTTTTCAGCACCCCTTGCACGTGGCCGTCGAAGGCCACGTCTACAACATCTCATGAGAAGTGTAAGTGGACCAATGAAGAACACTTTTTCCCGGACCTTCTCTAAGCGCTCCATGGGTACCAGTTGGATGCAAAGGTTATTCTTTCACCCAGTGACTCAACTAGCCTGGCATTCCAAAGACACAAAGTTTAGACCAGAAGTCTCTAGGAATGGTATTGAAGTTGGACCATATGAAGCGGAATATGAACAGACACACAATTTGCAGTGGGCTCATGGCAAGGCTGGTGAAGATAGGGTTCATGTAGTGCTTTCTGAAGAACAAGGGTGGTTGTTTATTGGGATATATGACGGTTTTAGTGGACCAGATGCACCTGATTTTCTGATGAGCCATCTTTATAGATTTATAGACAAGGAATTGGAAGGTTTACTTTGGGATTATGAAGATAAACCTGTAGATCCTCCTATACCTGAAGTCCCTGAAACTGTAAAAGCAGTGGTTGCTCCAAAATGCGGAAGACTGAAAATGTCTGATACTCATTCTAATTCAGATCAAGAAAATTTAGAAGCTTCTTCTGGTCCTGTAATGATCAAGGATCAATTATCTAACAGTGAGATAGTTGAGGAAAATGCTGAAGTTAGGGTGAATGTTGAACACCAGTTACCTAATTGTCGAAGTCCTAGTATCTCGTCTACTGTTCCAGCTTCTGTTCAACTAGGACAGTTGACTGGCAAGGGTAGAAAAAGTTTGCGGCTTTATGAGCTACTGCAGATGGAGTCTTGGGATGAACATGATTTTTTGTCAGTCTCAGGACTGTGTAAAGATTCTTCAGTGCATAGAGAATCAACACTAGATGGGTACATGAGACCTTGCTCATCTAATGTAAAAGAAGATAATTCTAGACATCAGGATGAAGGTCCCACCACGTCAGGAGAAAATGGAGGCACTAGGTTTGATTCAACCAACCAGGAGCCTGAAGCTGTTTTTTCTGTTTCAGGACAAAGGCAGAATTCAAGAAAGTCATTTATCAGTACAAAAATAAAACAAATGTACAGGAAGCCAAAGTCCTTGTGTAAGAAACTTTTTCCTTGGAGTTATGATTGGCATAGGGAGGAAAGTTGTGTTGACGAGAAAATATTGGAAGCCTCTGGACCAATTAGAAAATGTAAGTCTGGAGTAGATCATAATGCAGTTTTAAGAGCAATGGCTCGAGCTCTTGAAAAAACTGAAGAGGCATACATGGAAATGGTGGAGCAGAATCTGGACAAAAATCCAGAGCTTGCTTTAATGGGATCATGCGTTCTGGTGATGCTGATGAAGGATCAAGATGTTTATGTCATGAACCTTGGAGATAGTCGTGTGATTTTGGCTCAAGAAAGACCAAATGATCGTCATCCTAATCCGAGTTTTGTCAAGGATGATGTGAGGAATAGAAATCGATCTAGAGAGTCATTAGTACGCATGGAGCTAGATAGGATTTCAGAGGAGTCCCCAATTCACAACCATAACAATCATGTTAACAAGATGAACAAAAACCGAGAGATATCCATTTGCAGACTAAAAACGAGGGCTCTTCAGCTTTCCACAGATCACAGCACGGGTGTTGAAGAGGAAGTTTTTAGAATAAAAGCAGAACACCCTGATGATAATCAAGCCATATTGAATGATCGAGTGAAAGGAAATTTAAAAGTCACCCGAGCATTTGGTGCTGGGTTCTTGAAGCGGCCATCTTTCAACGAAGCTCTGCTGGAGGTGTTTCAAGTTGATTACGTGGGCACTGCTCCTTACCTAAGTTGCACTCCTTCTGTTCTTCATCATCGACTTTCCTCAAGTGATCGCTTCTTGGTACTCTCCTCTGATGGGCTTTACCAATATTTCAGCAATGAAGAGGTAGTAGCTCATGTCACACGGTTCATGGAAAATGACCCTGACGGTGATCCTGCTCAATACCTTATTGCAGAGCTTCTCTTGTGTGCTGCTAAAAAGAATGGTATGGACTTTCATGAATTGCTTGATATTCCTCATGGAGATCGTCGAAAATATCATGATGATGTCTCAGTTATGGTTGTCTCCTTGGAGGGAAGGATTTGGAAATCATCAGGATAA 2694 0.4265 MGNGTSRVVGCLVPFNGKSGVDLELLEPLDEGLGHSFCYVRPSIFESPAISPSNSERFTVDSSTLDSETLSGSFRHFSMEDSSGLHKPGKNFPETTFKTISGASVSANVSTARTGNQSALFTSDVLEPAASFEGTASFAAIPLQPVPRGSEPLNRFMSGPLERGYASGPLDKGVGFMSGPMEKGVMSGPLDATDKSNFSAPLARGRRRPRLQHLMRSVSGPMKNTFSRTFSKRSMGTSWMQRLFFHPVTQLAWHSKDTKFRPEVSRNGIEVGPYEAEYEQTHNLQWAHGKAGEDRVHVVLSEEQGWLFIGIYDGFSGPDAPDFLMSHLYRFIDKELEGLLWDYEDKPVDPPIPEVPETVKAVVAPKCGRLKMSDTHSNSDQENLEASSGPVMIKDQLSNSEIVEENAEVRVNVEHQLPNCRSPSISSTVPASVQLGQLTGKGRKSLRLYELLQMESWDEHDFLSVSGLCKDSSVHRESTLDGYMRPCSSNVKEDNSRHQDEGPTTSGENGGTRFDSTNQEPEAVFSVSGQRQNSRKSFISTKIKQMYRKPKSLCKKLFPWSYDWHREESCVDEKILEASGPIRKCKSGVDHNAVLRAMARALEKTEEAYMEMVEQNLDKNPELALMGSCVLVMLMKDQDVYVMNLGDSRVILAQERPNDRHPNPSFVKDDVRNRNRSRESLVRMELDRISEESPIHNHNNHVNKMNKNREISICRLKTRALQLSTDHSTGVEEEVFRIKAEHPDDNQAILNDRVKGNLKVTRAFGAGFLKRPSFNEALLEVFQVDYVGTAPYLSCTPSVLHHRLSSSDRFLVLSSDGLYQYFSNEEVVAHVTRFMENDPDGDPAQYLIAELLLCAAKKNGMDFHELLDIPHGDRRKYHDDVSVMVVSLEGRIWKSSG* 898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02006 897 FunFam Protein phosphatase 2C 32 254 420 - -
Rops6g02006 897 SUPERFAMILY PP2C-like 290 889 IPR036457 -
Rops6g02006 897 Gene3D - 261 418 IPR036457 -
Rops6g02006 897 MobiDBLite consensus disorder prediction 654 674 - -
Rops6g02006 897 Pfam Protein phosphatase 2C 713 850 IPR001932 -
Rops6g02006 897 ProSiteProfiles PPM-type phosphatase domain profile. 277 888 IPR001932 -
Rops6g02006 897 CDD PP2Cc 594 888 IPR001932 -
Rops6g02006 897 Gene3D - 508 894 IPR036457 -
Rops6g02006 897 PANTHER PROTEIN PHOSPHATASE 2C 280 887 IPR015655 GO:0004722|GO:0006470
Rops6g02006 897 MobiDBLite consensus disorder prediction 502 518 - -
Rops6g02006 897 SMART PP2C_4 277 886 IPR001932 -
Rops6g02006 897 MobiDBLite consensus disorder prediction 480 518 - -
Rops6g02006 897 Coils Coil 595 615 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02006 Rops-Chr6 37893454 37900079 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02006 1 897 PP2C-type Phosphatase Gene Family AT2G46920 63.787 0.0 1105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02006 - - pcin:129315875 1412.9