Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01996 ATGGGGGCACTGGTTCCAATTTACTTGTACATCGTTGCTTTCTTGTGCACTAGTGGAGCTGTTGCCTTGGCTTTGCTACACATTTATAAACACCTTGTCAATTACACCGAACCCACTTATCAACGCTTCATTGTTCGGATCGTTTTTATGGTTCCGGTTTATGCTTTAATGTCATTCTCGTCCCTTGTTCTACCTCAGGGCTCAATCTATTTTAATTCCATCCGGGAAGTCTATGAAGCTTGGGTCATTTATAATTTCCTATCACTGTGTCTTGCATGGGTTGGTGGTCCTGGAGCGGTGGTTCTTAGTTTAAGTGGTCGGGTTTTGAAGCCATCATGGTTTCTGATGACTTGTTGCTTTCCTCCTATACCACTAGATGGGCGTTTTATACGAAAATGCAAGCAAGGGTGTCTTCAGTTTGTGATTTTGAAGCCCATTTTAGTTGCTGTTACACTTATACTTTATGCAAAGGGGAAATATAAGGATGGAAATTTCAACCCCAAGCAATCGTACTTGTATCTCACAATCATATATACATTCTCATACACAATGGCTCTCTATGCTCTTGCTTTGTTTTATGTGGCATGCAAGGATCTGCTTCATCCATTCAATCCAGTCCCAAAGTTTATCATAATAAAATCTGTTGTATTCCTGACTTATTGGCAGGGTGTCTTAGTCTTCCTTGCTGCAAAGTCAGAATTAATTAAGGATGCAGATGAAGCTGCTCTACTTCAAAATTTTATCATTTGTGTGGAAATGCTTGTTGCTGCTGTGGGCCACTTTTATGCATTTCCATACAAAGAATATGCCGGTGCTAATGTAGCTGGATCTCGTGGTTTGACAGCTAGCCTTGGTCATGCTTTGATGTTAAATGACTTTTACCATGATACAGTTCACCAGTTTGCACCAACATATCATGATTATGTTCTCTATAACCACAATGAAGGTGAAGAAGGAACAAAGAAGTATAGATCACGAACTTTTGTTCCAATTGGCCCGGAGATGGACACTGTGAGGAGAAATAAGCATATGTTTGGAAACAAGACAGATGACATTCAGCTCTCGGATTTCTCTTCTTCTAATAGTAACGCTCCCTCAAATTCTGTTCCCATTTCTGATGTCTCACATTCTAGTGCAATGAGATCTTCCTTGCTAGTGGATGTGTCAAATTCTGCATCTGTGCCATACGATTTTACACTTATTGAATTAGATGCATCCGATTACCCTGAAAAGGTCCCAGCAGCTGATAAAGCTGGTACTAAGTGA 1266 0.4036 MGALVPIYLYIVAFLCTSGAVALALLHIYKHLVNYTEPTYQRFIVRIVFMVPVYALMSFSSLVLPQGSIYFNSIREVYEAWVIYNFLSLCLAWVGGPGAVVLSLSGRVLKPSWFLMTCCFPPIPLDGRFIRKCKQGCLQFVILKPILVAVTLILYAKGKYKDGNFNPKQSYLYLTIIYTFSYTMALYALALFYVACKDLLHPFNPVPKFIIIKSVVFLTYWQGVLVFLAAKSELIKDADEAALLQNFIICVEMLVAAVGHFYAFPYKEYAGANVAGSRGLTASLGHALMLNDFYHDTVHQFAPTYHDYVLYNHNEGEEGTKKYRSRTFVPIGPEMDTVRRNKHMFGNKTDDIQLSDFSSSNSNAPSNSVPISDVSHSSAMRSSLLVDVSNSASVPYDFTLIELDASDYPEKVPAADKAGTK* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01996 421 PANTHER ORGANIC SOLUTE TRANSPORTER-RELATED 8 362 IPR005178 -
Rops6g01996 421 SMART Solute_trans_a_2 9 269 IPR005178 -
Rops6g01996 421 MobiDBLite consensus disorder prediction 352 373 - -
Rops6g01996 421 Pfam Organic solute transporter Ostalpha 10 269 IPR005178 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01996 Rops-Chr6 37811310 37815909 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01996 - - gmx:100789701 757.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03853 8 79342376 79347045 Rops6g01996 6 37811310 37815909 PCT
Rops6g01996 6 37811310 37815909 Rops8g03392 8 72961214 72978112 PCT