Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01989 ATGGCGAACCTTTTCTGGGTTGCCATTGTAATAGCACTTGTTTTTATCAACTGGGTCGATGGCTTTGATGCCTATCAATATAATCACATCAATGAAACAGAGCTGTCTCTGTTGGAGGCTCATGAAGCTTCCTTCTCCTTCGTTGGTAGGAAACCTCTAATGGTAGGACTCACCCTTATTCCAAGTGCTGCTGCTAAAGGAGCAGTCTGCTTGGATGGAACATTGCCTGGTTATCATTTTCATCGGGGATATGGATCAGGAGCAAACAGCTGGCTTGTTAATTTAGAGGGAGGCGGGTGGTGTAATAATGTCAGAACATGTGTTTATCGCAAGAAAACACGGCGTGGATCATCAACATTCATGGAAAAGGAGATACCTTTTACAGGAATATTAAGCAATAATGCCGAAGAGAATCCAGATTTTTTCAACTGGAACAGAGTAAAAATTCGTTATTGTGATGGTGCCTCTTTTACCGGGGATGGTGAAGATAAGGCTGCGCAACTGCAATTCAGAGGACAACGTATTTGGTGGGCTGCAATGGAGGATTTGATGTCAAAGGGAATGCGTTTTGCCAAGCAGGCTCTTCTTTCTGGATGCTCGGCGGGTGGTTTGGCTACCATTATACACTGTGATGAATTTCAAGGTCTATTTCCAAGGACTACCAAAGTGAAGTGTCTTAGTGATGCTGGGTTATTTCTTGATGCCACTGATGTATCTGGCGGGCATACCCTCAGGAATTTTTTCAGTGGGGTTGCAAGGCTACAGGGAGTGCAGAAGAATCTGCCACGCATTTGTACTAATCACCTTGATCCCACTTTGTGCTTCTTCCCTCAGAACTTTATTGCCAGTATTAGAACCCCGCTATTCATTCTTAATAGTGCCTATGATTCATGGCAGATCCTATCAAGCTTAATTCCTCCATCGGCAGATCCCCATGGCTATTGGCGAGCTTGCAGATTAAACCATGCTAAATGTACTAGTTCACAAATCCAATTTCTGCAAGGATTCAGGAATCAAATGCTGAATGTTATTAGGGGCTTCTCAAGATCAAATCAGAATGGATTGTTCATAAATTCGTGTTTTGCTCACTGCCAATCTGAAAGGCAAGATACATGGTTTGCTGACAATTCTCCTGTCATTGGGAACAAGGCAATTGCTCTGGCTGTTGGAGACTGGTATTTCGACCGAGCAGTTGTTAAGGACATTGATTGTCCTTACCCCTGTGATAATACCTGCCACAATCTGATTTTCAGATGA 1257 0.4336 MANLFWVAIVIALVFINWVDGFDAYQYNHINETELSLLEAHEASFSFVGRKPLMVGLTLIPSAAAKGAVCLDGTLPGYHFHRGYGSGANSWLVNLEGGGWCNNVRTCVYRKKTRRGSSTFMEKEIPFTGILSNNAEENPDFFNWNRVKIRYCDGASFTGDGEDKAAQLQFRGQRIWWAAMEDLMSKGMRFAKQALLSGCSAGGLATIIHCDEFQGLFPRTTKVKCLSDAGLFLDATDVSGGHTLRNFFSGVARLQGVQKNLPRICTNHLDPTLCFFPQNFIASIRTPLFILNSAYDSWQILSSLIPPSADPHGYWRACRLNHAKCTSSQIQFLQGFRNQMLNVIRGFSRSNQNGLFINSCFAHCQSERQDTWFADNSPVIGNKAIALAVGDWYFDRAVVKDIDCPYPCDNTCHNLIFR* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01989 418 PANTHER NOTUM-RELATED 39 414 IPR004963 GO:0016787
Rops6g01989 418 Pfam Pectinacetylesterase 51 397 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01989 Rops-Chr6 37735134 37739906 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g01989 1 418 Carbohydrate Esterase AT1G57590 66.190 0.0 589
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01989 K19882 - gmx:100810716 755.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03859 8 79427869 79432583 Rops6g01989 6 37735134 37739906 PCT