Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01974 ATGGGTGCTGATCTTAAAGCTGAATTATCCGAGAAAACTCCCATTTTTGGTCTTAAGGTTTGGGAGATAATTGGAATTGCAGTAGGATTGTCTATTATTATCATCCTCTCTGTGCTCTCATATTGCCTCACTTCACGGAAGAAATCTAGAAAAGCCAAGGACAAGATTCCTGTGAGTCAAATACCTACTGTCTCAAAGGAAATCAAGGAAGTGAGGGTTGAGCAGGTACCAGCAAATGGATTTGTTCCTCGTGATGGAATACTTCTTACAATTCATGATAAATCCAGTGACAAAGAATCAGACAAAGTTATGGTTCATTTAGGTGTGGGGAAGTCGAAGTATGGGGATAGTGGAAGTCACTCAGATTCATTTCATCACTTGGAGAAAGATGGAGGTGGGTCACAATCAGGGGAAGAAGGTAGTAGCTCTGGCACGGTTAAAGTGTACAGGTCATCTTCTTCATACCCTATAACAGCTCCTTCACCTCTGTCTGGCCTTCCAGAATTCTCTCACTTGGGTTGGGGTCACTGGTTTACATTGAGGGATCTTGAACGTGCTACAAACCGTTTTTCAAAAGAAAATGTCGTTGGAGAGGGTGGTTATGGAGTTGTTTACCAGGGACAGTTGATCAATGGGACTCCAGTGGCAGTTAAAAAGATACTCAACAACATTGGTCAAGCAGAGAAAGAATTTAGAGTGGAAGTTGAAGCAATTGGCCATGTCCGACATAAAAATTTGGTTCGTCTTTTGGGGTACTGCATTGAGGGGACTCACAGGATGTTAGTGTATGAGTATGTCAATAATGGAAACTTAGAGCAGTGGCTTCATGGTGCTATGCGACATCATGGATATCTTACTTGGGAAGCACGTATCAAGATTCTCCTTGGCACAGCTAAGGCGCTTGCATATTTGCATGAAGCGATTGAGCCAAAGGTGATTCACCGAGATATCAAGTCAAGCAACATTTTAATTGATGACGACTTCAATGCCAAGGTTTCTGATTTTGGCCTGGCCAAGTTACTAGGTTCTGGGATGAGTCATGTAACAACACGAGTTATGGGAACCTTTGGATATGTGGCCCCTGAATATGCAAATAGCGGTCTTTTAAATGAAAAGAGTGATGTTTATAGCTTTGGTGTTGTGCTATTGGAAGCAATTACTGGAAGAGATCCAGTTGACTATGGCCGTCCAGCACAGGAAGTTAATGTGGTTGATTGGCTGAAGATGATGGTTGGAAACAGGCGATCAGAAGAAGTGGTGGACCCAAACATTGAGGTGAGGCCATCAATTAGAGCATTAAAACGGACTCTTTTAACTGCTTTAAGATGTGTAGATCCAGATTCAGAGAAAAGACCCAAGATGGGCCAAGTCGTACGAATGCTTGAGTCAGAGGAGTACCCTTTACCAAGAGAGGACCGAAGGCCACGAAGAAATAGTGGGGTTAGCACAGAAATTGAATCCCAGAAGGATAATTCAGACACAGACGGGAGTAGATCGGAAAGCGGAAGGTAA 1512 0.4306 MGADLKAELSEKTPIFGLKVWEIIGIAVGLSIIIILSVLSYCLTSRKKSRKAKDKIPVSQIPTVSKEIKEVRVEQVPANGFVPRDGILLTIHDKSSDKESDKVMVHLGVGKSKYGDSGSHSDSFHHLEKDGGGSQSGEEGSSSGTVKVYRSSSSYPITAPSPLSGLPEFSHLGWGHWFTLRDLERATNRFSKENVVGEGGYGVVYQGQLINGTPVAVKKILNNIGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGTHRMLVYEYVNNGNLEQWLHGAMRHHGYLTWEARIKILLGTAKALAYLHEAIEPKVIHRDIKSSNILIDDDFNAKVSDFGLAKLLGSGMSHVTTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVVLLEAITGRDPVDYGRPAQEVNVVDWLKMMVGNRRSEEVVDPNIEVRPSIRALKRTLLTALRCVDPDSEKRPKMGQVVRMLESEEYPLPREDRRPRRNSGVSTEIESQKDNSDTDGSRSESGR* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01974 503 ProSiteProfiles Protein kinase domain profile. 190 469 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g01974 503 MobiDBLite consensus disorder prediction 448 503 - -
Rops6g01974 503 PANTHER OS01G0323000 PROTEIN 5 492 - -
Rops6g01974 503 Gene3D Phosphorylase Kinase; domain 1 172 265 - -
Rops6g01974 503 CDD STKc_IRAK 207 462 - -
Rops6g01974 503 SUPERFAMILY Protein kinase-like (PK-like) 174 477 IPR011009 -
Rops6g01974 503 ProSitePatterns Protein kinases ATP-binding region signature. 196 219 IPR017441 GO:0005524
Rops6g01974 503 FunFam Putative receptor-like serine/threonine-protein kinase 266 477 - -
Rops6g01974 503 Pfam Protein kinase domain 191 458 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g01974 503 FunFam Putative receptor-like protein kinase 172 265 - -
Rops6g01974 503 MobiDBLite consensus disorder prediction 488 503 - -
Rops6g01974 503 SMART serkin_6 190 461 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g01974 503 ProSitePatterns Serine/Threonine protein kinases active-site signature. 312 324 IPR008271 GO:0004672|GO:0006468
Rops6g01974 503 MobiDBLite consensus disorder prediction 118 133 - -
Rops6g01974 503 Gene3D Transferase(Phosphotransferase) domain 1 266 473 - -
Rops6g01974 503 MobiDBLite consensus disorder prediction 448 480 - -
Rops6g01974 503 MobiDBLite consensus disorder prediction 114 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01974 Rops-Chr6 37550461 37555916 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g01974 132 464 Trihelix Transcription Factor Family AT1G70460 47.929 1.19e-93 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Rops6g01974 Pkinase 8.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01974 - - gmx:100778269 828.935