Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01964 ATGTTGAAAATGGGTTTTGATGGGAATTCAGCAGCAACGATTGAGATTAAAGATCTTAGATTTACATACCCTGGCATCGACGGTCATCCTCCGCCGGGTTCCACTCCTCTCATTCAAGACTTCTCTCTTACCCTCCATTCCGGTGATCGCTGCCTTCTCGTCGGATCCAATGGCGCTGGCAAGACCACCATCCTCAAGATATTAGGAGGGAAGCACATGGTGGAGCCTGAAATGGTTCGTGTGCTCGGAAGGTCAGCTTTTCATGACACCACTTTAACTTCTTCTGGTGATCTCTGTTATCTTGGTGGCGAGTGGAGGCGAGATGTTGCTTTTGCGGGTTTTGATGTTCCGATACAAATGGACGTTTCTGCGGAAAAAATGATATTTGGTGTTGGTGGGATTGATCCTGAAAGAAGAGCTGAGCTGATCAAGGTATTAGATATCAATCTTTCCTGGAGATTGCATAAAGTATCTGATGGTCAAAGAAGAAGAGTGCAAATTTGTATGGGTCTTCTCAAACCATTCAAGGTTCTTCTTCTGGATGAGATAACAGTTGACCTTGATGTTCTAGCAAGAGCTGACCTCCTGAGATTTCTAAGAAAGGAATGTGAAGAGAGGGATGCCACTATAATCTATGCAACACATATATTCGACGGTCTTGAGGATTGGCCCACTGATATTGTTTATGTAGCCCATGGAAAGCTCCAACTTGCAATGCCCATAGAGAAAGTCAAAGAAATGAGCAAACTGTCACTAATGAGAACAGTAGAAAGTTGGCTGCGGAAAGAACGAGATGAAGACAAAAGAAAAAGAAAAGAAAGGAAGGCTGCTGGCCTTCCTGAATTTGGGAAGCAAGTTGAGGGAAGCCGTGTAACAGGGGATCCAGCGCGAGCTGCTGTTCGAGTAATTAATAATGGTTGGGCAGGAGGACGATTACATTCCACCGTTGCTGGGGAAGAAAACTTTGTCCTTAGCTCAAACCGAGTATTGAGACAGTAG 999 0.4474 MLKMGFDGNSAATIEIKDLRFTYPGIDGHPPPGSTPLIQDFSLTLHSGDRCLLVGSNGAGKTTILKILGGKHMVEPEMVRVLGRSAFHDTTLTSSGDLCYLGGEWRRDVAFAGFDVPIQMDVSAEKMIFGVGGIDPERRAELIKVLDINLSWRLHKVSDGQRRRVQICMGLLKPFKVLLLDEITVDLDVLARADLLRFLRKECEERDATIIYATHIFDGLEDWPTDIVYVAHGKLQLAMPIEKVKEMSKLSLMRTVESWLRKERDEDKRKRKERKAAGLPEFGKQVEGSRVTGDPARAAVRVINNGWAGGRLHSTVAGEENFVLSSNRVLRQ* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01964 332 Gene3D - 9 286 IPR027417 -
Rops6g01964 332 PANTHER SKFA PEPTIDE EXPORT ATP-BINDING PROTEIN SKFE 12 261 - -
Rops6g01964 332 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 14 257 IPR003439 GO:0005524
Rops6g01964 332 SMART AAA_5 47 234 IPR003593 GO:0016887
Rops6g01964 332 Pfam ABC transporter 39 184 IPR003439 GO:0005524
Rops6g01964 332 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 13 250 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01964 Rops-Chr6 37425036 37428410 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g01964 14 211 Calmodulin-binding Proteins AT2G36910 23.256 1.07e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01964 K12608 - gmx:100782386 566.614
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g01964 6 37425036 37428410 Rops6g01964 6 37425036 37428410 ECH