Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01951 ATGGAGTCTTTCGAACCAAACATAAATTTCAGTCATTCAGAAACGTTTCGAGAATCCAATCACAAGAAGCGCAGGAAAATCGGAGACCACGCCGACGGCGATCGGAATTCGCTCAATCTCATGCCGTGGAGATCTGAGGCGGAGCAACAGATCTACTCTCGCAAGCTCGTCGAAGCTCTCCGCCGGGTTCCTTCACCGGCGACGACCAAACCTAGAGTCGCCGGTCAAGTTCGTGAGACCGCCGACAAAGTCCTCGCCGCGAGGGCCAAAGGAAGAACGCGGTGGAGTCGCGCGATTCTTGGCCGGTGGAAGAAACATCAGCACAAGAAAGTGAAGAAGGCTTCCACCGTATTGAAGATTGATAGAGAGAGGAGGAGGAGAAAGCGGTTACCGGCTGTGCAGAAGAAAGCGCGTGTTCTGAGCCGGTTGGTTCCCGGTTGCCGGAAACTTTCCTTCCCGAACCTTCTGGAAGAAACCACGGACTATGTTTCCGCCTTGGTGATGCAAGTGAGAGCCATGACGGCTCTCGCGGAGTTACTCGCCGGTGGCTCGCCGCCGGTCACATGTTGA 570 0.5509 MESFEPNINFSHSETFRESNHKKRRKIGDHADGDRNSLNLMPWRSEAEQQIYSRKLVEALRRVPSPATTKPRVAGQVRETADKVLAARAKGRTRWSRAILGRWKKHQHKKVKKASTVLKIDRERRRRKRLPAVQKKARVLSRLVPGCRKLSFPNLLEETTDYVSALVMQVRAMTALAELLAGGSPPVTC* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01951 189 MobiDBLite consensus disorder prediction 1 34 - -
Rops6g01951 189 CDD bHLH_AtIBH1_like 131 177 IPR044549 GO:0006355
Rops6g01951 189 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 44 180 IPR044660 GO:0006355
Rops6g01951 189 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 114 166 IPR011598 GO:0046983
Rops6g01951 189 MobiDBLite consensus disorder prediction 15 33 - -
Rops6g01951 189 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 117 182 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01951 Rops-Chr6 37308878 37309709 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g01951 1 173 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09250 44.271 2.65e-36 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01951 - - gmx:100783462 254.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g01951 6 37308878 37309709 Rops6g01951 6 37308878 37309709 ECH