Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01937 ATGGTGTGCGAGGAAGAGCTGTTGGTTGAAAAAGTCTGCGACCTGTATGATCAAATCTCAAGCCTAGAGACTCTCAAACCCTGCAAAAATGTCGACACCCTTTTCACTAAACTCGTTCTCACATGCATGCCACCTAGCCCAATTGATGTTACCAAACTCAGCAAAAGTGTGAAAGAGATTAGATCTAAGCTTATAAGGCTCTGTGGTGAAGCTGAAGGACTTTTAGAAAGCCACTACTCAACCATCCTAGGTTCATATGAGAACCCACTCAATCATCTCCATATTTTCCCTTACTATTCCAATTACCTCAAACTTGGTGTCCTTGAGTTCACTATCCTTAGCCAGCACTGCAACCATGTCCCTAGCAAAATTGCCTTTGTGGGCTCAGGCCCTCTTCCTCTTACTTCACTTGTCTTGGCCTCTAACCATCTAACCAACACAACTTTTCACAACTATGACATCGACCCTTTAGCCAATTCCAAAGCTCTTGGTTTGGTTTCCTCTGATCCTGACTTGTCAAAGCGTATGGTTTTTCACACCAATGATATATTGGATGTGTCAAACGCTTTGAAAGACTATGAAGTTGTTTACTTGGCAGCCCTTGTGGGCATGGGCAATGAGGAAAAGAATCGAGTCATTGATCACTTAGCTAAGTACATGGCCCCAGGAGCACTTCTGATGCTCAGGAGTGCCCATGGTGCTCGTGCTTTCCTCTATCCAGTGATTGATCCTAGTGATCTTCGAGGTTTTGAGGTCCTCTCTGTGTTCCACCCCACGGATGAGGTTATCAATTCTGTTATCTTAGCACGAAAGTACCCTGTGCCTATACTATCAAACAAGTGTTCTGATGAGATCCAAGTCTTCAACCACCTCAACCATGAGAATATGATTGAGGAATTGGTAGTTGAGGAGCAGATGTAA 921 0.4397 MVCEEELLVEKVCDLYDQISSLETLKPCKNVDTLFTKLVLTCMPPSPIDVTKLSKSVKEIRSKLIRLCGEAEGLLESHYSTILGSYENPLNHLHIFPYYSNYLKLGVLEFTILSQHCNHVPSKIAFVGSGPLPLTSLVLASNHLTNTTFHNYDIDPLANSKALGLVSSDPDLSKRMVFHTNDILDVSNALKDYEVVYLAALVGMGNEEKNRVIDHLAKYMAPGALLMLRSAHGARAFLYPVIDPSDLRGFEVLSVFHPTDEVINSVILARKYPVPILSNKCSDEIQVFNHLNHENMIEELVVEEQM* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01937 306 PANTHER NICOTIANAMINE SYNTHASE 3 4 282 IPR004298 GO:0030410|GO:0030418
Rops6g01937 306 Pfam Nicotianamine synthase protein 5 273 IPR004298 GO:0030410|GO:0030418
Rops6g01937 306 Gene3D Vaccinia Virus protein VP39 6 273 IPR029063 -
Rops6g01937 306 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 276 IPR004298 GO:0030410|GO:0030418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01937 Rops-Chr6 37198549 37199469 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g01937 1 304 Nicotianamine Synthase Gene Family AT5G04950 59.062 1.12e-135 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01937 K05953 - gmx:100794250 493.041