Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01931 ATGGGTGAGTTGAGCGAGGTTCTAACACAGATTCTGATACCAGTGGCTGCATTAATTGGAATTGTGTTTGCTTTGCTTCAGTGGATTTTGGTCTCAAGGGTCAGGGTCTCTGCTGCTGATCACACTGATGCAGACAACGGATATAAAAAAAGCTTAATAGCAGATTCAGACTTGGAGAATGGTGTTCAGGGTCTTGAAGTTACCATTAAGTGTGCTGAAATCCAGCATGCCATTTCTGTTGGAGCTACTTCATTTCTGTTTACCGAGTATAGATACCTGGCTATCTTCATGGGAGTATTTGGTGCAATAATTTTCCTCTTTCTGGGCTCTGTGAAGGGCTTTAGTACCAAAAGTGAACCTTGCACTTATAACGAAGGCAATCTTTGTAAACCAGCACTTGCAAATGCCATCTTTAGCACTGTTGCCTTCTTGCTTGGTGCTCTAACCTCTGTCCTTTCTGGCTTTCTCGGGATGAAAATTGCAACCTTTGCCAATTATAGAACAACTCTTGAAGCAAGGAAGGGAATAGGAAAGGCATTTGTTACTGCTTTTCGCTCTGGTGCAGTGATGGGCTTTCTTCTTGCTGCAAATGGTCTGTTGGTGCTATACGTCTCCATCAATTTATTCAAACTGTATTATGGAGATGACTGGGAGGGACTTTATGAGTCTATTACTGGCTATGGACTTGGAGGTTCATCAATGGCACTCTTTGGAAGAGTTGGAGGAGGTATCTACACTAAAGCTGCTGATGTTGGTGCTGACCTTGTGGGAAAAGTTGAACAAAATATCCCTGAAGATGATCCATGCAACCCAGCTGTTATTGCAGACAATGTAGGAGACAACGTTGGAGATATTGCTGGGATGGGTTCCGACTTATTTGGGTCTTATGCAGAATCATCATGTGCAGCTTTATTTGTTGCATCAATATCATCATTTGGAGTAAATCATGACTACACAGCCATGTCATATCCTCTCATCATAAGCTCAGTGGGAATAGTGGTTTGCTTAATTACAACTCTTTTTGCAACTGACCTGTTTGAAATTAAAGACGTGAGCCAAATAGAAGCATCCTTAAAACAGCAGCTTCTTATCTCTACTGTCTTAATGACTGCTGGTATTGCCATAGTCAGCTTCTTTGCTTTGCCATCAGAATTTACTCTTTATAACTTTGGAACCAATAAGGTTGTCAAGAACTGGCACCTTTTCTTCTGTGTTGCAATTGGCTTATGGGCTGGACTTGTAATTGGATACATTACTGAGTACTACACTAGCAGTGCTTACAGTCCAGTGCAAGATGTGGCAGACTCCTGCAGGACTGGAGCTGCAACAAATGTGATTTTTGGATTGGCACTGGGATATAAATCAGTCATTATTCCCATATTTGCTATTGCGGTTGCTATTTATGTAAGCTTCAACCTTGCCGCCATGTATGGAATTGCTGTTGCAGCTCTTGGAATGCTCAGTACCATTGCCACTAGTCTTGCCATTGATGCCTATGGTCCAATTAGTGATAATGCTGGAGGTATTGCAGAAATGGCTGGAATGAGGCATGAGATACGAGAAAGAACAGATGCACTGGATGCTGCAGGAAACACCACAGCCGCTATAGGCAAGGGTTTTGCTATTGGATCAGCTGCACTCATGTCTTTTGCATTGTTTGGTGCTTATGTGAGCAGAGCAGGCATCAAAACAGTGAATGTGCTGACCCCAAAAGTTTTTATTGGTTTGATTGTTGGAGCAATGCTTCCCTACTGGTTTTCAGCCATGACAATGAAGAGTGTTAGGAGTGCAGCTCTCAAAATGGTTGAAGAAGTTCGTAGGCAATTCAATTCTATTCCCGGTCTTATAGAAGGAAGAGCAAAACCAGATTATGCCACTTGTGTAAAGATTTCCACTGACGCCTCACTTAAGGAGATGGTCCCACCCGGTGCATTGGTTCTGGTTACACCACTCGTTGCTGGAACATTCTTTGGGGTAGAGACCCTTGCTGGCTCTCTTGTTTCTGGTGTGCAGATATATGGCGACATATTTGTTCAATTCCGTGTGGCAATTTCGGCTTCAAACACTGGTGGTGCATGGGATAACGCCAAGAAATACATAGAGGCTGGTGCTACTGCGCATGCTGCATTACTGGGTCCAAAGGGCTCAGACGCTCACAAGGCAGCTGTCATAGGCGACACTTCGGGTCCCTCACTCAACATTTTGATCAAGCTGATGGCAGTTGAATCATTGGTATTTGCTCCATTCTTCGCAACTCATGGAGGCTTAATCTTTAAAATATTCTGA 2286 0.4331 MGELSEVLTQILIPVAALIGIVFALLQWILVSRVRVSAADHTDADNGYKKSLIADSDLENGVQGLEVTIKCAEIQHAISVGATSFLFTEYRYLAIFMGVFGAIIFLFLGSVKGFSTKSEPCTYNEGNLCKPALANAIFSTVAFLLGALTSVLSGFLGMKIATFANYRTTLEARKGIGKAFVTAFRSGAVMGFLLAANGLLVLYVSINLFKLYYGDDWEGLYESITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVEQNIPEDDPCNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALFVASISSFGVNHDYTAMSYPLIISSVGIVVCLITTLFATDLFEIKDVSQIEASLKQQLLISTVLMTAGIAIVSFFALPSEFTLYNFGTNKVVKNWHLFFCVAIGLWAGLVIGYITEYYTSSAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAVAIYVSFNLAAMYGIAVAALGMLSTIATSLAIDAYGPISDNAGGIAEMAGMRHEIRERTDALDAAGNTTAAIGKGFAIGSAALMSFALFGAYVSRAGIKTVNVLTPKVFIGLIVGAMLPYWFSAMTMKSVRSAALKMVEEVRRQFNSIPGLIEGRAKPDYATCVKISTDASLKEMVPPGALVLVTPLVAGTFFGVETLAGSLVSGVQIYGDIFVQFRVAISASNTGGAWDNAKKYIEAGATAHAALLGPKGSDAHKAAVIGDTSGPSLNILIKLMAVESLVFAPFFATHGGLIFKIF* 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01931 761 Pfam Inorganic H+ pyrophosphatase 43 746 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Rops6g01931 761 Hamap Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 7 751 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Rops6g01931 761 PIRSF H+-PPtase 8 759 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Rops6g01931 761 NCBIfam V-type H(+)-translocating pyrophosphatase 8 756 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Rops6g01931 761 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 5 751 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01931 Rops-Chr6 37113271 37116979 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g01931 4 626 Primary Pumps ATPases AT1G15690 77.937 0.0 999
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01931 K23025 - gmx:100812548 1324.69