Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01923 ATGATGGAGATCGAGAAAAGACGTTCCAAGGGAAGCTTCCTCAGCTTCTTTGATTGGAATGGGAAATCTCAAAAGAAGTTGTTTTGTGACAATCACAAGTTACCTGAGGTTTCAAAGCAAGGAGAGGAAAGCATGGATGACATGAAAAATTCACAGGTCAATAGGATAAAGATGGATAACAATGTGGAAAATCCTAGAAATATCGCAAGTTGTGATTCAAACTCTGCCCTATCAATTAGTAGTGATGAAGGGTGTGGGAGTAAGGCCCCAGGTTTAGTAGCCAGACTCATGGGTTTGGATTCATTGCCTGTTTCAACTGTCTCTGAACTCGCCTCCACTTCATTATATGGCTCCAACTCTCTTGGATCTTCTCATTGTAATGAGAGTACTCATCATTCAATGGGTGGCTATTGCCATGTGGATTCCATAAACATGCCACTTAGGCAGGAGAAGTCTTCTCGGGGTGCTATTGAATCAAAGGCTCGGAAAGTGGAAACCCGGGCAATAAAGAGATTTCAAACTGAAATGTTGCCTCCAAGGTCTGCTAAACCCATTTCAGTTACTCACTACAAACTTTTGTCTCCCATTAAGAGCCCTGATTATATACAACCTAAGAATGCAGCTCATATAATGGAGGCAGCCACTAAGATAATTGAGGCAAGTCCCCAGCCATATGTGGGGAATAGAGTGTCTTCAGTTGGACCTTCATCTGTTCCCTTAAGAATTCTTGATCTGAAAGAGAAATTGGAAGCTGCACAATATGAATCCAAGCTCATGGATCGCTGCACTGCTAACCTTGTGAATGGCAAGCTCAGTGAGAGGAGCAACAATTTATATAAATCTACTCCAACGTACAAAGGTTCAAGAGATTCAGAAAAAAGTAGTTCTCGCGCAAGTAAAGGAAAATCTGTTTCAGTTGCGAAACCACTGAAAGCCAATGTTCAAATCAGAGATACATTGACTTTGAATGGTAACAGGGGATATATAAAGCAGAAAGAACATAATGAGATAAAATCAAACCAATTGTCCACGAGCCAGAAGAAACAGATTACAGACCGGGTCAGGCTCATGGAGCAGAGAACTTGTACGGGCCAGAACAGCAATGTGCTTGGGCAGAATAATCAAAAGCAGAATAGTATAGCAAACAAGGGTAAATCAGCTTCAAAAGTAGACTCCAATAAGCCAACACGAACTTGGTCTTTGGAAAATTCTACTGGAGCTAGGAAGACAACAAACAAGGGTGCTGTAAATGCCAACATTGAGTCCAAAAGGTTGGGCACGAGGGTAACTGATACACAAAAGGAGTTTCCAGTATCCAAAAGAAAGAGTATTTCCCAAAAGAAAAGGTATACAAGCAAGGATGTTCAGAATGAAGCAAGAGGTTCTGATAATGCATCTAATAATTATGAAAGCAAGTCCATAAAATGCACTATTACAACAGATGGAAGTATTGACCAAGATACATCTAGCATGAAAGAAAGCAAGGATGTGATTTCATTTACATTTACATCTCCCTTGAGGAGAAACATGCCAGAGTCACAGTCCTCTACTGAGCAAGTGATGGGAACAAGGAACAGAATTGATATCAATTCTTTTGGTCATAGTGATAAGCTTTATCCCAAAAAATTATCATTATCTCCTCCCAGGTTACATGTAATAGATGGTGATGCTTTAAATGTCCTTTTGGAGAAAAAACTACAAGAATTGACATCTAAAATTAACCCACCTCAGTGTAACCTGGACATGGAAGGGTCTTCTGCTGGTTTAAGATCTAGTTTGGAAGACAATTTTCAGAGTGTGGTAAGCACCACAGCAAGTGAACAAGAAAGAAGCTTTCACCCCAACCTGCTTGGTAATAAATTGGATAGCATGCATGACTTCTGTTGTTCTTCAAGTGATGATATTTTGCCTAACATGAATCAGCAACTGCAGTCAGAGCCAATGGAAGAGCCTAGCTGTAGCAACAACAGTGAAAGCGGAAATGATATAAGTTGTCAGCATACAAGAGCAATTTTTGAAAATCCTTTTGTCAGTGAAAGTTACTTGGATAGTGAAGATAGTACATATGGCAGCACAGTTTATTCTTCCATGCAAGATGAAGAAGTATCTAATTTTTCTCCAATAAATGAATCTATATCACTTGAAAACGAGGTGAAATGGTCTGAGCAAAGCTCTTTCACAGTGGTGGGGGGTAACATGGCCATCAAACAATTAAATGGAATGTCAAATATTGATGATTTTACAAGATCAGCAGGGAACATGGAACTTGAATATGTAAAGGATATACTCAGCAATGCAGAGTTGATGGCAGAAGAATTTGTGGTGGGTCAGAAAGATAAGATCATAATGCCAAATCTCTTTGATCTGCTGGAGAATCAGAGAATTGGGGCAGAAAACTATGAAGAGTACTCCAAGCTTGAGAGGAAGGCTATATTTGACTCTTTAAGTGAGTGCCTAGAATTAAGATGTAGGCAAGTTTTTGTTGGAAGCTGCAAAGCATGGCCTAAATGGTTGGCATCAGTTCAGAGGAAGAACTGGTTAGCAGAAGAATTGTACGAGGAGATGCTAGGCTTTAGAAGCATGGAAGAAGAGGTACTAGTGGATGAGCTTGTCAGTAAAGACATGAGCACTCGATGGGGTAGATGGATTGACTTTGACATTGAAGCCTGTGAAGAGGGCTTAGAACTTGAGCTTGACATGGTAACCTATTTGATTGATGAATTGGTTTATGATTTGTTGCTTGTTTAA 2748 0.3996 MMEIEKRRSKGSFLSFFDWNGKSQKKLFCDNHKLPEVSKQGEESMDDMKNSQVNRIKMDNNVENPRNIASCDSNSALSISSDEGCGSKAPGLVARLMGLDSLPVSTVSELASTSLYGSNSLGSSHCNESTHHSMGGYCHVDSINMPLRQEKSSRGAIESKARKVETRAIKRFQTEMLPPRSAKPISVTHYKLLSPIKSPDYIQPKNAAHIMEAATKIIEASPQPYVGNRVSSVGPSSVPLRILDLKEKLEAAQYESKLMDRCTANLVNGKLSERSNNLYKSTPTYKGSRDSEKSSSRASKGKSVSVAKPLKANVQIRDTLTLNGNRGYIKQKEHNEIKSNQLSTSQKKQITDRVRLMEQRTCTGQNSNVLGQNNQKQNSIANKGKSASKVDSNKPTRTWSLENSTGARKTTNKGAVNANIESKRLGTRVTDTQKEFPVSKRKSISQKKRYTSKDVQNEARGSDNASNNYESKSIKCTITTDGSIDQDTSSMKESKDVISFTFTSPLRRNMPESQSSTEQVMGTRNRIDINSFGHSDKLYPKKLSLSPPRLHVIDGDALNVLLEKKLQELTSKINPPQCNLDMEGSSAGLRSSLEDNFQSVVSTTASEQERSFHPNLLGNKLDSMHDFCCSSSDDILPNMNQQLQSEPMEEPSCSNNSESGNDISCQHTRAIFENPFVSESYLDSEDSTYGSTVYSSMQDEEVSNFSPINESISLENEVKWSEQSSFTVVGGNMAIKQLNGMSNIDDFTRSAGNMELEYVKDILSNAELMAEEFVVGQKDKIIMPNLFDLLENQRIGAENYEEYSKLERKAIFDSLSECLELRCRQVFVGSCKAWPKWLASVQRKNWLAEELYEEMLGFRSMEEEVLVDELVSKDMSTRWGRWIDFDIEACEEGLELELDMVTYLIDELVYDLLLV* 916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01923 915 Pfam DUF761-associated sequence motif 80 108 IPR032795 -
Rops6g01923 915 MobiDBLite consensus disorder prediction 363 426 - -
Rops6g01923 915 MobiDBLite consensus disorder prediction 363 469 - -
Rops6g01923 915 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 2 911 - -
Rops6g01923 915 Pfam Domain of unknown function (DUF4378) 755 907 IPR025486 -
Rops6g01923 915 MobiDBLite consensus disorder prediction 275 306 - -
Rops6g01923 915 MobiDBLite consensus disorder prediction 427 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01923 Rops-Chr6 37061524 37065813 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g01923 1 913 TRM (TON1 Recruiting Motif) Superfamily AT5G26910 32.047 8.08e-96 319
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01923 - - gmx:100797988 1221.07