Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01905 ATGGCAACAGAGCCAGTCTTGTCATTCTCTGTTGTATCCGTGGTCCAAGATGTTCTTCAAAAACATGGAGGTCGATTAAGCGACATTGACTTAGCATCAAGAAAGGCTGAAGAAGCTTCCTCAAGAAGGAATGAAGCAGCAGGGTGGCTGCGAAAGACAGTTGAAGTTGTTGGAGGGAAAGACATGCCAGATGAGCCTTCTGAAGAAGATTTCAGGATTGCATTGCGTAGTGGCATTATCCTTTGCACTGCTCTCAACAAAATTCAACCCGGAGCAGTGCCCAAGGTAGTTGAAGCCCCCTGCGATAACATTATTATTCCTGATGGGGCAGCCCTATCCGCTTATCAGTACTTTGAAAATGTAAGGAATTTTTTTGTAGCTGTGGAGGAAATGGGCCTTCCCACCTTTGAAGCTTCTGATTTGGAACAGGGTGGGAAATCTTCGAGGATAGTGAATTGTGTTCTTGCGCTCAAGTCATACAGTGAATGGAAACTGGGAGGCAAAATTGGGTCATGGAAATATGGTGGGAATCCAAAGCCACCTACCTCTGGGAAATCAATTGTGAGGAAAAACTCAGAACCATTCATGAGGTCTCTGTCAAAAGCTATGTCTTCAGGTGATAGAGATGGTTGGCTGAGTGATCTCTCTTCAAACATTGAAGCGGAGCCTGATATCAGTGAAGGGGGTTCTATTCCTTCCTTGAATTCACTAGTTCGAGAATATTTGTCTGATAAGAAGCAAGAAGAAATTCCCACTTTAATTGAGACTCTGCTTAGCAAAGTCATGGAGGAGTTTGAACATCGCATGCTAATCCAACAAGAAACGAATAAAACAACTCAAGAAGACAAGGCACCATCTGAAGCAGATAAATCAAATTTAAAAGCTGCTAGTAATGATGAAGAGATGGAAGAAAATGAAGATGCAGAGGTTAAACAAAAGGAATGTCATGATGTAAAGTACAATGCCAACGAAGAATCAAGGAGCCAGCTTCCGAAGCAACAAAAGTTAGTACAACAGCAAAATGGAAACATCCAGGAATTGAAAATGATGGTTCATCAAACAAAAACAGGAATGCAGTTTCTGCAAAAGAAATACCAGGAAGATTTCATCAATCTAAGTAAGCACCTGCGTGGCCTAGCTTCTGCTGCTTCAGGATATCAGAAAATTCTTGAAGAAAACCGCAAGTTATACAATCAAATGCAGGACCTGAAAGGAAATATTAGGGTGTACTGCAGAGTTAGACCCTTAATAGATGGGCAACCAAACCATCATGGCACTGTCAATAACGTAGAGGAAGAAAGTATCTCAATCATAATACCTTCCAAGAACGGGAAAGAGGTGAGGAAGACATTTAGTTTCAACAAAGTGTTTGGTCCTTCTTCAACCCAAGGAGAGGTTTTCTCAGATACTCAACCTCTGATTCGTTCAGTTCTGGATGGCTACAATGTATGTATATTTGCCTATGGCCAAACAGGATCAGGAAAAACACACACTATGTCTGGACCAAACAATATGACTGAGGAAACAGTAGGTGTCAACTACCGTGCATTGAGAGATCTTTTCCTTCTCTCAGAACAAAGGAAAGACACCATTCACTATGATATCTCTGTTCAGATGCTTGAGATTTACAATGAGCAAGTCAGAGACTTACTAATGACAGATGAAATTCGCAACAGTTCCCATAATGGTATTAACGTGCCAGATGCAAACCTTGTTCCTGTTTCATCGACTTCTGATGTCTTGAATTTGATGAACTTGGGACAAAAGAATCGGTCGGTTGGTTATACTGCCATGAATGATCGGAGTAGCCGTTCTCATAGCTGCTTGACAGTTCATGTTCAAGGAAGAGAGCTTACATCAGGAAATAGTCTTCGTGGTTGTATCCACTTAGTTGACTTGGCTGGAAGTGAGAGGGTTGATAAATCTGAGGTCACAGGAGATAGGCTGAAGGAGGCTCAACATATTAACAAGTCACTTTCTGCTTTAGGAGATGTAATTGCTTCACTTGCCCAAAAGCAATCACACGTTCCCTACAGGAACAGTAAACTTACTCAGCTGCTTCAGGATTCTCTTGGAGGCCAAGCAAAGACTCTCATGTTTGTTCATATTAGTCCGGAGCCTGAAGCTCTTGGAGAAACGCTCAGTACACTGAAGTTCGCTGAAAGGGTCTCCACTGTTGAACTTGGCGCTGCACGAGTTAACAAAGATAGTGCACATGTGAAAGAGCTTAAAGAACAGATTGCTAGTCTAAAGGCAGCCTCAACGAGGAAAGATGGAGAGTTGGAACACTTTAAATCAAGGTTGAAATCCCAATCATCTTTCCCTACACTAGCTAGTTGGACTTCTGGAGGTCGTAAGCTACCAACAGATGATTCTAATAGCATGGAGGACCAGAAAGAGGCTTCATCCAAGCTGAAAAGAAGAAGCCTTGATCCCCAAGACATGTGTAGGAATTCACTTATGTGGCCACAAGCTGGGGTAAATAAGAGGGAGGACGATAAGGAATCAGTTTCTGGAGATTGGGTCGGTAGAAGTATGAAAAGGAATGACAGCATAACAACTGATGATAGCCTCGCGGGACAATGGGAAACAGAAAGCAAACAATCATCTTCCCCATTGCATCTTCCCAGGTATCTTTCAGAACCTTCAAAAATTTGCATGGAGATGGCCACCACAAATGACTATGATGAGCTTGAGCAAGCAACTAGTGAATGTTCAGAATCAGACACGAGTTGGCATTCCTATGTACCTAAAGCACCCCCTCTTTCCAATGGATCAGTGTCTAAAGCAAAGAAATCAGCTCATCCCAGACAAACAAAGAACCGAGAAACCAGGAGTGTGATCCCGTCACTGATTCCTTCACCATCAAGGAAGCAATCCTCCGTAGTTAGTCAATCAAGAAAGCATCCAGGTTCCATTGTTGCTAATAAGAGAAGAACCGGAAATGCCAAGTGA 2955 0.4254 MATEPVLSFSVVSVVQDVLQKHGGRLSDIDLASRKAEEASSRRNEAAGWLRKTVEVVGGKDMPDEPSEEDFRIALRSGIILCTALNKIQPGAVPKVVEAPCDNIIIPDGAALSAYQYFENVRNFFVAVEEMGLPTFEASDLEQGGKSSRIVNCVLALKSYSEWKLGGKIGSWKYGGNPKPPTSGKSIVRKNSEPFMRSLSKAMSSGDRDGWLSDLSSNIEAEPDISEGGSIPSLNSLVREYLSDKKQEEIPTLIETLLSKVMEEFEHRMLIQQETNKTTQEDKAPSEADKSNLKAASNDEEMEENEDAEVKQKECHDVKYNANEESRSQLPKQQKLVQQQNGNIQELKMMVHQTKTGMQFLQKKYQEDFINLSKHLRGLASAASGYQKILEENRKLYNQMQDLKGNIRVYCRVRPLIDGQPNHHGTVNNVEEESISIIIPSKNGKEVRKTFSFNKVFGPSSTQGEVFSDTQPLIRSVLDGYNVCIFAYGQTGSGKTHTMSGPNNMTEETVGVNYRALRDLFLLSEQRKDTIHYDISVQMLEIYNEQVRDLLMTDEIRNSSHNGINVPDANLVPVSSTSDVLNLMNLGQKNRSVGYTAMNDRSSRSHSCLTVHVQGRELTSGNSLRGCIHLVDLAGSERVDKSEVTGDRLKEAQHINKSLSALGDVIASLAQKQSHVPYRNSKLTQLLQDSLGGQAKTLMFVHISPEPEALGETLSTLKFAERVSTVELGAARVNKDSAHVKELKEQIASLKAASTRKDGELEHFKSRLKSQSSFPTLASWTSGGRKLPTDDSNSMEDQKEASSKLKRRSLDPQDMCRNSLMWPQAGVNKREDDKESVSGDWVGRSMKRNDSITTDDSLAGQWETESKQSSSPLHLPRYLSEPSKICMEMATTNDYDELEQATSECSESDTSWHSYVPKAPPLSNGSVSKAKKSAHPRQTKNRETRSVIPSLIPSPSRKQSSVVSQSRKHPGSIVANKRRTGNAK* 985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01905 984 SMART kinesin_4 404 734 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops6g01905 984 MobiDBLite consensus disorder prediction 897 913 - -
Rops6g01905 984 Coils Coil 386 406 - -
Rops6g01905 984 MobiDBLite consensus disorder prediction 775 789 - -
Rops6g01905 984 SMART ch_5 42 160 IPR001715 GO:0005515
Rops6g01905 984 MobiDBLite consensus disorder prediction 280 299 - -
Rops6g01905 984 MobiDBLite consensus disorder prediction 943 971 - -
Rops6g01905 984 Coils Coil 733 760 - -
Rops6g01905 984 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 406 761 IPR027417 -
Rops6g01905 984 MobiDBLite consensus disorder prediction 852 876 - -
Rops6g01905 984 MobiDBLite consensus disorder prediction 775 876 - -
Rops6g01905 984 PRINTS Kinesin heavy chain signature 676 697 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops6g01905 984 PRINTS Kinesin heavy chain signature 480 501 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops6g01905 984 PRINTS Kinesin heavy chain signature 596 613 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops6g01905 984 PRINTS Kinesin heavy chain signature 627 645 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops6g01905 984 Gene3D Kinesin motor domain 348 728 IPR036961 -
Rops6g01905 984 MobiDBLite consensus disorder prediction 897 984 - -
Rops6g01905 984 SUPERFAMILY Calponin-homology domain, CH-domain 44 175 IPR036872 -
Rops6g01905 984 CDD KISc_C_terminal 404 728 - -
Rops6g01905 984 MobiDBLite consensus disorder prediction 274 313 - -
Rops6g01905 984 FunFam Kinesin-like protein KIN-14I isoform A 27 179 - -
Rops6g01905 984 CDD CH_AtKIN14-like 42 159 - -
Rops6g01905 984 Gene3D - 32 162 IPR036872 -
Rops6g01905 984 MobiDBLite consensus disorder prediction 790 813 - -
Rops6g01905 984 ProSiteProfiles Kinesin motor domain profile. 406 726 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops6g01905 984 PANTHER KINESIN-LIKE PROTEIN KLP-3 47 943 IPR027640 GO:0003777|GO:0007018
Rops6g01905 984 MobiDBLite consensus disorder prediction 827 841 - -
Rops6g01905 984 Pfam Calponin homology (CH) domain 41 162 IPR001715 GO:0005515
Rops6g01905 984 Pfam Kinesin motor domain 412 725 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops6g01905 984 FunFam Kinesin-like protein KIN-14I isoform A 401 768 - -
Rops6g01905 984 ProSiteProfiles Calponin homology (CH) domain profile. 40 162 IPR001715 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01905 Rops-Chr6 36936056 36941974 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g01905 394 760 Calmodulin-binding Proteins AT5G65930 40.106 2.27e-75 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01905 K10406 - gmx:100808197 1340.1