Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01902 ATGAAGCAACCACTTGTTCCGCTGGCAACCCTGATTGGCCGTGAGCTACGAAATGAGAAAACTGAAAAGCCTTTTGTGAAGTATGGGCAGGCCGGCTTGGCAAAGAAAGGAGAAGATTACTTTCTAATCAAGACAGATTGCCAGAGGGTTCCCGGGGATTCATCAACACTGTTTTCTGTCTTTGCGATCTTTGATGGGCATAATGGTATATCCGCTGCTATTTTTGCGAAGGAAAACATATTAAATAATGTTATGAGTGCAATACCACAAGATATCAGCAGGGATGAGTGGCTTCAAGCTCTGCCTCGGGCTCTAGTTGTTGGTTTTGTGAAAACTGACATAGAATTTCAGCAAAGAGGGGAAACTTCTGGAACAACAGCTACATTTGTTCTGATTGATGGATGGACTGTTACTGTTGCATCTGTTGGGGATTCCCGTTGCATACTAGATACCCAGGGAGCTGTTGTTTCTCTCTTGACAGTTGATCACAGATTGGAAGAAAATGTAGAAGAGAGGGAACGTGTTACCGCCAGTGGTGGTGAAGTTGGAAGACTCAATGTATTTGGAGGCAATGAGGTAGGCCCTCTTCGCTGCTGGCCTGGTGGATTGTGCCTTTCTAGATCAATTGGTGACACAGATGTGGGAGAATATATTGTTCCAATACCACATGTTAAGCAAGTAAAGCTTTCAAATGCTGGTGGAAGGCTTATTATAGCTTCTGATGGTATTTGGGATGCTTTATCTTCTGATATGGCTGCCCAGTCATGTCGGGGTCTACCCGCAGAACTTGCTGCAAAGCTGGTAGTTAAGGAAGCTCTAAGGTCAAGAGGGCTGAAGGATGATACAACCTGCCTTGTTGTAGATATTATTCCTTCGGACCATCCCGTGTTACCAACAATTCCTAAAAAGAAACATAATATGCTAACTTCTCTTCTCTTTGGAAAGAAATCTCAAAACTCTACAAACAAAGGAACTAGTAAGCTTTCTGCAGTCGGTGTTGTGGAGGAGTTATTTGAAGACGGTTCTGCAATGCTTACAGAGAGGTTGGGTAAGGATTTTCCTTCTAATATGAGTTCTGGGATTTTCCGCTGTGCGGTTTGCCAAGCAGATCAACCCGCTGGTGATGGTTTATCAGTGAACACCGAGCCTTTTTTCCCTCCAGTATCTAAGCCATGGGAAGGTCCATTCCTCTGCACAAACTGTCTGAAGAAGATAGATGCCATGGAAGGAAAGAGGTCTAGCAGGCCCACAGTGACAACAGCATAG 1266 0.4439 MKQPLVPLATLIGRELRNEKTEKPFVKYGQAGLAKKGEDYFLIKTDCQRVPGDSSTLFSVFAIFDGHNGISAAIFAKENILNNVMSAIPQDISRDEWLQALPRALVVGFVKTDIEFQQRGETSGTTATFVLIDGWTVTVASVGDSRCILDTQGAVVSLLTVDHRLEENVEERERVTASGGEVGRLNVFGGNEVGPLRCWPGGLCLSRSIGDTDVGEYIVPIPHVKQVKLSNAGGRLIIASDGIWDALSSDMAAQSCRGLPAELAAKLVVKEALRSRGLKDDTTCLVVDIIPSDHPVLPTIPKKKHNMLTSLLFGKKSQNSTNKGTSKLSAVGVVEELFEDGSAMLTERLGKDFPSNMSSGIFRCAVCQADQPAGDGLSVNTEPFFPPVSKPWEGPFLCTNCLKKIDAMEGKRSSRPTVTTA* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01902 421 FunFam probable protein phosphatase 2C 5 27 294 - -
Rops6g01902 421 SMART PP2C_4 15 287 IPR001932 -
Rops6g01902 421 SUPERFAMILY PP2C-like 30 289 IPR036457 -
Rops6g01902 421 ProSiteProfiles PPM-type phosphatase domain profile. 24 289 IPR001932 -
Rops6g01902 421 PANTHER PROTEIN PHOSPHATASE 38 288 IPR015655 GO:0004722|GO:0006470
Rops6g01902 421 Pfam Protein phosphatase 2C 55 273 IPR001932 -
Rops6g01902 421 CDD PP2Cc 35 289 IPR001932 -
Rops6g01902 421 Gene3D - 25 293 IPR036457 -
Rops6g01902 421 SMART PP2C_SIG_2 42 289 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01902 Rops-Chr6 36909455 36912671 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g01902 2 420 PP2C-type Phosphatase Gene Family AT1G09160 76.611 0.0 652
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01902 - - gmx:100794630 759.214