Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01893 ATGGATGATGATGATGATGAAGAGCTACATGATCTTTCTTTGTCTTCATGGATTAAAAATTCGAAGGATCTTGTAGAGTCTATACAATTTGACTTGGCTACAGTTGAAACTGCTACAAACAACTTCTCAAATGAGAATAAGATTGGCCAAGGTGGATTTGGTGAGGTTTATAAGGGTATCCTCCCTAACGGACAAGAGATAGCTGTGAAGAGGCTATTAGTAACCTCCTTGCAGGGTACACTAGAGTTCAAGACTAAAGCTACCCTTGTGGCCAAGCTTCAATATAGAAACTTCGTGAGGCTATTGGGATTTTGCTTGGAAGGGCAGGAGAATATGCTTGTGTATGAATACATACCAAACAAAAGCCTTGATCACTTCCTATTTGGTATGGACCTTTTCAACTCTTCTATTATTTTAGATAACATCTTGATTAATAAATACGATTGA 447 0.3781 MDDDDDEELHDLSLSSWIKNSKDLVESIQFDLATVETATNNFSNENKIGQGGFGEVYKGILPNGQEIAVKRLLVTSLQGTLEFKTKATLVAKLQYRNFVRLLGFCLEGQENMLVYEYIPNKSLDHFLFGMDLFNSSIILDNILINKYD* 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01893 148 SUPERFAMILY Protein kinase-like (PK-like) 18 132 IPR011009 -
Rops6g01893 148 ProSitePatterns Protein kinases ATP-binding region signature. 48 70 IPR017441 GO:0005524
Rops6g01893 148 FunFam Cysteine-rich receptor-like protein kinase 10 6 117 - -
Rops6g01893 148 ProSiteProfiles Protein kinase domain profile. 42 148 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g01893 148 Gene3D Phosphorylase Kinase; domain 1 7 117 - -
Rops6g01893 148 Pfam Protein tyrosine and serine/threonine kinase 44 127 IPR001245 GO:0004672|GO:0006468
Rops6g01893 148 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 20 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01893 Rops-Chr6 36785359 36786057 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g01893 11 140 Receptor kinase-like Gene Family AT4G23160 55.385 1.81e-44 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops6g01893 PK_Tyr_Ser-Thr 2.3e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01893 - - lja:Lj0g3v0096479.1 176.407