Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01873 ATGAACCTTTTCTCAACCTCCACCTCCACCTCTTCTTCCACTGCTTCCGATGAAAACTTGGAAGAGAAATACAGAAAGAAGAAAAAATGGAAGGACTGCTTCAGGAGGCTCACAAGGCATGTCTTAGCCATGCAAGAAGAAATGCATAAGTTATTGGAAGCCATAAACAAACGACAAAAAGCTAAGTATCAAGAAAATGGACAAAAAGCTCAATTGTGGGAAGATATATCAGCAGGTATGCAGAGGCTTGGATACAATAGGAATGCCAAAAGGTGCAAAGAGAAATGGGAGGACATCAACAAGTACTTCAAGAAAATCAAGGAAAGTAACAAGCAAAGGCGTGAAGATAGCAAGACATGTCCCTATTTTCATGAGCTTGATGCTCTATGCAAAGAAAAGAGCAAAACACAACCCCTTTGGTGCTTGATTCCACAACATGAGGCCAAATGA 450 0.4067 MNLFSTSTSTSSSTASDENLEEKYRKKKKWKDCFRRLTRHVLAMQEEMHKLLEAINKRQKAKYQENGQKAQLWEDISAGMQRLGYNRNAKRCKEKWEDINKYFKKIKESNKQRREDSKTCPYFHELDALCKEKSKTQPLWCLIPQHEAK* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01873 149 Gene3D - 44 105 - -
Rops6g01873 149 MobiDBLite consensus disorder prediction 1 21 - -
Rops6g01873 149 ProSiteProfiles Myb-like domain profile. 45 100 IPR001005 -
Rops6g01873 149 MobiDBLite consensus disorder prediction 1 17 - -
Rops6g01873 149 Pfam Myb/SANT-like DNA-binding domain 45 129 IPR044822 -
Rops6g01873 149 PANTHER FI21293P1 9 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01873 Rops-Chr6 36608548 36610233 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g01873 61 135 Trihelix Transcription Factor Family AT1G76880 77.333 6.57e-38 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Rops6g01873 Myb_DNA-bind_4 1.1e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01873 - - gmx:100799041 147.902