Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01867 ATGACTTTTAGTCGGAAGAAGATGGGTTGTGGTTCTGTGCTTCTTGCCATGATCTTCATCATCATCACCCTCTTGATGCTCCTATCATCACAAGGTACCCACATTTTGTCTGTGGGTGCTTTAATGAATGCAGCTGGAAGCTTCCATGTACCAGAGATGTATTTCAATGAGGAGAGTGAACAAGAGAATGAAAACAAGGTTAAGAAAATCTCAGGACTTGATGAGAATGAAGAGAAGGAAGCTTTGATAGTTGAAAAGTTTAGATCTTTGCTTGGTCTCAGGAGTTTTCACACCAGAGTACCACCACCACCCAATGGTGATTCTGAGTTTCTCTCCCCATCACCTTCTCCATCACCAAATACTGAAGCTGAGGCTCCAGCTCCTTCTCCGGTTCCTCACCTTCATCATCATTCCCATCATCCAAGACACCACTCTCATTGGAATCTCCCACCCAACAAAACTCATCATGAAGATAGAGGCAGGGCTAAAAGAATACTGGTAGCTGTTATTGTATCTGTGGGAGTTGCTACATTAGTTGGTGCTTGTGGGTTAATCTTTGTATGTTGGAAACTCAGGAATCACACAAAGAAGCCCAAAAGGACAATGCCACTTGGTAGCAATGACAAAGGGACAAGAGGTAATTGTCAAAATTCATCAAGCAAGGTGAGTTTGAACTCAGGAATAGATCTGTTTTATCTTGATGCTTTAGGTGAGGATATAGAACAACATGCCTGCAGCCTGAAAAAGACTTGCCAGAATAGGGGTGAATATGATAATGATAATGTTAGCAGCTCTGCCACCAAGGAAATTGCATCTGTTCATGAAGATGTGGAAACAGTGAAACATGAACATGAATCTGATGTCGGCAACTCTTCTTCTAGGGATAAAATTATTCCTGAAGATTGCTGCCATTCATCAGATAATGAAAGTTTTCATTCCATTGTTGATTCACAATCAAATACAAGACTTTCCAATGCTTCAGCTGGTAGCTTGAGTGACACATTCTCTGTGTCCCCTAAAAATTCAAATTCATTAGCAAACCAATTTCTTAGTCCTCTCCAAAACTCAAACACAGAATCTCATCAACCACCATATAGTCCAAAACATGAAGAGCAAGAGATTGAAACCTCTGTCCAATCTCCAAAAACCTCCACTTCCACTTCCCCTCCCCCTCCTCCACCACCTCCACCTCCACCACCGCCTCCAACCCTGCAAATGCCACTGTTTTCTTTGCATTCTCTTACTTCATCTAGAGTTTCCTCTCACTCTCACTCTTCACTTTCTTTGACATCTCATAATTTGTCATCTCCGAGAAATTCAGACACTTTCTCAGGATCAAATCAAAGTCCAGAAAAAGAGTTGCTTTCTCCGCCTCCACCTCCACCTAACCCCACAAAATCTCCTCCCAACATTCCCCCACCACCATGCCCACCTCCATTTCTAAAAGGCAATAGCAACAGTGCCAAAACCCCACCTCCTCCACCATCTCAACTCCCTCAATTTACCCCTCTTGGTAAAGATGGTGCACCCCTGCCAAAACTCAAACCACTTCACTGGGACAAAGTAAGAGCTGCACCAAATCGCACCATGGTTTGGGATAAGCTACGATCAAGCTCATTCGAGTTGGATGAGGAAATGATCGAGTCACTTTTTGGGTACAATTTACAAAATTCAATTAAGAATGACGAATCAAAGAGTAAAACCCCATCACCAAGCAAGCATGTACTGGAACCAAAACGGCTGCAAAACATTACAATACTCTCAAAAGCTCTGAACGCGACAGCTGAACAAGTATGCGAAGCACTAATGCAAGGGAAGGGCTTGTCTTTGCAACAACTAGAGGCACTGGTGAAAATGGTACCCACCAAGGAAGAAGAGTCTAAGCTATCCAATTATAAAGGTGACATCAATGAATTGGGGTCGGCCGAAAAGTTTGTAAGGGCAATGCTAAGCGTACCATTTGCTTTTCAACGAGTAGAAGGCATGCTTTATAGAGAGACTTTTGATGATGAAGTCGTTCACCTAAGGAACTCATTTTCAATGCTTGAGGAGGCATGCATGGAACTAAGATCAAGTAGGCTCTTCTTGAAATTACTTGAAGCAGTGCTCAAAACAGGAAACCGTATGAATGTTGGTACAATAAGGGGAGGTGCTAGAGCATTTAAGCTTGATGCCCTTCTCAAGCTTGCAGATGTTAAGGGAACTGATGGGAAAACTAACTTACTCCATTTTGTTGTTCAAGAGATTGTTCGTTCAGAAGGGATTAGAGTTTCAGATAGCATTATGGGGAAAATCAGCCAGAAAAGTAAGAACAGAACAGAAGAAGAGAAGGAAGAAGATTACAGAAGGATGGGACTAGAACTAGTTTCTGGTCTTAGCACTGAATTATACAATGTAAAGAAGACAGCTACAATTGATATAGATGTTCTTGCAAGCTCTGTGTCAAATTTATCAGATGGGGTGGCTAGGTTGCAACATCTAGTAGACAAGGATTTGCATGAGGATGAAAAAAGCCATAACTTTGTTCACTCAATGAAGTCATTCTTACACTATGCAAATGGGAACCTGAAGGAGTTGCAAGGAGATGAAGATAGAGTGGTAGCACGTGTGAAAGAAATCACAGAGTATTTTCATGGGGATGTGAGCAAAGATGATGCAAACCCACTCAGGATCTTTGTGATAGTGAGAGATTTTCTGGGAATGTTAGATAATGTTTGTAAAGAGCTTAGAAGGTCTAAAGCTCCACGCAGCCCAAACCCTCTTGCTCCCTTCAAATAG 2778 0.4208 MTFSRKKMGCGSVLLAMIFIIITLLMLLSSQGTHILSVGALMNAAGSFHVPEMYFNEESEQENENKVKKISGLDENEEKEALIVEKFRSLLGLRSFHTRVPPPPNGDSEFLSPSPSPSPNTEAEAPAPSPVPHLHHHSHHPRHHSHWNLPPNKTHHEDRGRAKRILVAVIVSVGVATLVGACGLIFVCWKLRNHTKKPKRTMPLGSNDKGTRGNCQNSSSKVSLNSGIDLFYLDALGEDIEQHACSLKKTCQNRGEYDNDNVSSSATKEIASVHEDVETVKHEHESDVGNSSSRDKIIPEDCCHSSDNESFHSIVDSQSNTRLSNASAGSLSDTFSVSPKNSNSLANQFLSPLQNSNTESHQPPYSPKHEEQEIETSVQSPKTSTSTSPPPPPPPPPPPPPPTLQMPLFSLHSLTSSRVSSHSHSSLSLTSHNLSSPRNSDTFSGSNQSPEKELLSPPPPPPNPTKSPPNIPPPPCPPPFLKGNSNSAKTPPPPPSQLPQFTPLGKDGAPLPKLKPLHWDKVRAAPNRTMVWDKLRSSSFELDEEMIESLFGYNLQNSIKNDESKSKTPSPSKHVLEPKRLQNITILSKALNATAEQVCEALMQGKGLSLQQLEALVKMVPTKEEESKLSNYKGDINELGSAEKFVRAMLSVPFAFQRVEGMLYRETFDDEVVHLRNSFSMLEEACMELRSSRLFLKLLEAVLKTGNRMNVGTIRGGARAFKLDALLKLADVKGTDGKTNLLHFVVQEIVRSEGIRVSDSIMGKISQKSKNRTEEEKEEDYRRMGLELVSGLSTELYNVKKTATIDIDVLASSVSNLSDGVARLQHLVDKDLHEDEKSHNFVHSMKSFLHYANGNLKELQGDEDRVVARVKEITEYFHGDVSKDDANPLRIFVIVRDFLGMLDNVCKELRRSKAPRSPNPLAPFK* 926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01867 925 Pfam Formin Homology 2 Domain 508 902 IPR015425 -
Rops6g01867 925 SMART it6_source 504 917 IPR015425 -
Rops6g01867 925 MobiDBLite consensus disorder prediction 408 452 - -
Rops6g01867 925 MobiDBLite consensus disorder prediction 199 219 - -
Rops6g01867 925 MobiDBLite consensus disorder prediction 274 303 - -
Rops6g01867 925 MobiDBLite consensus disorder prediction 274 291 - -
Rops6g01867 925 MobiDBLite consensus disorder prediction 323 363 - -
Rops6g01867 925 Coils Coil 56 76 - -
Rops6g01867 925 PANTHER FORMIN-RELATED 421 914 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Rops6g01867 925 MobiDBLite consensus disorder prediction 133 149 - -
Rops6g01867 925 MobiDBLite consensus disorder prediction 98 158 - -
Rops6g01867 925 MobiDBLite consensus disorder prediction 385 406 - -
Rops6g01867 925 MobiDBLite consensus disorder prediction 323 515 - -
Rops6g01867 925 Gene3D Formin, FH2 domain 527 918 IPR042201 -
Rops6g01867 925 MobiDBLite consensus disorder prediction 453 481 - -
Rops6g01867 925 SUPERFAMILY Formin homology 2 domain (FH2 domain) 457 913 - -
Rops6g01867 925 ProSiteProfiles Formin homology-2 (FH2) domain profile. 504 925 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01867 Rops-Chr6 36495055 36499075 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g01867 432 925 FH2 protein (formin) Gene Family AT3G05470 69.583 0.0 680
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01867 - - gmx:100793761 1177.54