Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01856 ATGTGTTCATCATGCTTTGCTGCTATTTGGCTTGAAATGGCTCTATTTGGTCATGCTCCTGCCTGTGTTGCTGAGTTATTGGCTTTGTCTGGCTCGTTGAGGAATGATGGATCAATCTTGATTGAAGAACAACTTGAGACACATACTATAGCAGCATGGAGAGAGGGAAAACTACAGAAATGTGGAACCAATAATAATGGGAGAACATATCCTCAGCGTTTTGTTTATGCTGAGCCCCATGAATGTCTAAAAGGTGTTGCTTTGAAAATTTTGCAAAACAAGATGGCATTAGTTCCTATTATCCATTCTTCTTCAGAGGATGGTTCATTCCCTCGGGTGTTACACCTTGCTTCCCTCTCAGGAATACTAAAATGCATATGCAGGCATTTTAAGCACTCTTCTGGTTCTTTGCCCATTCTTCAACTACCGATTGGTTCAATACCTCTGGGTACGTGGGTGCCAAAAGCAGAGGAATCCAATAAACAGTCACTTGCTATGCTAAGGCCAAATGCATCTCTTGGTTCTGTTCTGTCTCTATTGATTCAAGCTAAAGTTAGCTCAATACCAATTGTGGATGATAATGATTCATTACTTGATATATATTCAAGAAGTGATTTTACCGCATTGGTTAAAAATAAAGCGTATGCTAAGATAAGTCTGGATGAATTTAGTATCCATCAGGCATTATTTTTGGCACGAGGTGCAAATTTTCCTCACTGGCTTCACATTGGCCAGAGATGTCATATGTGTTTGAGGTCTGATTCTTTGCACAAAGTAATGGAGCAGTTGGCTAATCCTGGTGTAAGACAACTTGTGATTGTGGAGGCTGGCAGCAGACGCGTGGAAGGGATCATTTCTTTAGGTGATATGTTCAGATTCTTGTTAGATTATCATCATCTATGA 903 0.402 MCSSCFAAIWLEMALFGHAPACVAELLALSGSLRNDGSILIEEQLETHTIAAWREGKLQKCGTNNNGRTYPQRFVYAEPHECLKGVALKILQNKMALVPIIHSSSEDGSFPRVLHLASLSGILKCICRHFKHSSGSLPILQLPIGSIPLGTWVPKAEESNKQSLAMLRPNASLGSVLSLLIQAKVSSIPIVDDNDSLLDIYSRSDFTALVKNKAYAKISLDEFSIHQALFLARGANFPHWLHIGQRCHMCLRSDSLHKVMEQLANPGVRQLVIVEAGSRRVEGIISLGDMFRFLLDYHHL* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01856 300 ProSiteProfiles CBS domain profile. 159 218 IPR000644 -
Rops6g01856 300 SMART cbs_1 163 211 IPR000644 -
Rops6g01856 300 SMART cbs_1 246 295 IPR000644 -
Rops6g01856 300 Gene3D - 24 135 IPR046342 -
Rops6g01856 300 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 39 295 - -
Rops6g01856 300 Pfam CBS domain 248 295 IPR000644 -
Rops6g01856 300 Pfam CBS domain 164 208 IPR000644 -
Rops6g01856 300 SUPERFAMILY CBS-domain pair 162 297 IPR046342 -
Rops6g01856 300 Gene3D - 146 296 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01856 Rops-Chr6 36343516 36349192 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01856 - - gmx:100790062 392.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g01856 6 36343516 36349192 Rops6g01856 6 36343516 36349192 ECH
Rops8g03982 8 81160742 81169526 Rops6g01856 6 36343516 36349192 PCT