Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01827 ATGGAAGTTAATACTACTACCACTCTTGCTGCTACAAAGAACCATACTTTCACACGGCATCACTTATATTCAGAAAACCATTACCATAGTCATGGCCATTTCCCCTTCAAAACCATTCTCATAACTATAGCAGTGGTCGCCTTAGTTACCATCCTATTTATCATTTTTCTGGTCGTATGCTTGATCCGTAGGCAAAAATCTTCCAGCAAGAATGGAACTTGCAAAGATGACAGTAGAGTGCTTCATGACACAAGTAGCAGGCTTATCGCTTCAACAATTTTGAGCATTAATTCTAGCCCAGATGTGAAAGGTGGGTGTCTTTATGGGGGGAATATGAGCAGGACACCAGTACCTAAATTTCGAGGAGTCCAAGTTTTCACGTATAAGGAGCTAGAAGTTGCCACGGATGGATTCAGCGAAGCAAATGTGATTGGTAATGGAGGGGTTGGTTTGATGTATAAAGGAGTCCTAAGTGATGGCACTTTGGCTGCAATTAAGTTGCTGCAGTGTGAAGGTAAGCAAGGAGAGCGTGGCTTCAGAGTAGAGGTCGATCTCCTAAGCCGGTTGCACTCTCCTTATTTGGTGGAGTTACTTGGCTATTGTGCTGACCAACACCACAGGTTATTGATCTTTGAATACATGCCCAATGGTACACTACAACACCATCTTCACTCTCCCAATGATCAAACTCAACCGTTGGATTGGTGGGCCCGGATGAGGATAGCCCTTGATTGTGCTAGGGCCCTGGAGTTCCTGCATGAACATGCAGTCTCACCCGTTATCCACCGAGATTTCAAGAGTAACAACGTTCTACTGGATCGAAATTTTCGTGGCAAGGTGTCAGATTTTGGTTTGGCTAAGATGGGATCAGAGAAGAGGAACGGTCAAGTTTCCACCCGTGTGTTGGGGACCACTGGATATTTAGCACCAGAGTACGCCTCCACTGGTAAGTTAACTACAAAGTCAGATGTTTACAGCTATGGTGTGGTTCTTCTCGAACTGCTAACAGGACGTGTACCAGTTGATATTAAGCGGGCCCCTGGAGAACACGTCCTTGTCTCTTGGGCTCTTCCAAGGTTGACAAATAGAGAAAGGGTGGTGGAAATGGTTGACCCAGCTCTACGTGGACAGTACTCAAAGAAGGATTTAATTCAGATAGCTGCCATTGCAGCAATGTGCATACAGCCAGAAGCTGATTATAGGCCGCTCATGACAGATGTTGTACAATCACTGATACCCCTTGTCAGGAACCCATCTTCTCTGGGTTCATCCAGTTCCCTAAGATTTCAGAAACAAATACCAGGAGGACCAAGTTATTAG 1320 0.4515 MEVNTTTTLAATKNHTFTRHHLYSENHYHSHGHFPFKTILITIAVVALVTILFIIFLVVCLIRRQKSSSKNGTCKDDSRVLHDTSSRLIASTILSINSSPDVKGGCLYGGNMSRTPVPKFRGVQVFTYKELEVATDGFSEANVIGNGGVGLMYKGVLSDGTLAAIKLLQCEGKQGERGFRVEVDLLSRLHSPYLVELLGYCADQHHRLLIFEYMPNGTLQHHLHSPNDQTQPLDWWARMRIALDCARALEFLHEHAVSPVIHRDFKSNNVLLDRNFRGKVSDFGLAKMGSEKRNGQVSTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDIKRAPGEHVLVSWALPRLTNRERVVEMVDPALRGQYSKKDLIQIAAIAAMCIQPEADYRPLMTDVVQSLIPLVRNPSSLGSSSSLRFQKQIPGGPSY* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01827 439 CDD STKc_IRAK 144 414 - -
Rops6g01827 439 PANTHER OS07G0668900 PROTEIN 119 420 - -
Rops6g01827 439 Gene3D Transferase(Phosphotransferase) domain 1 214 423 - -
Rops6g01827 439 SUPERFAMILY Protein kinase-like (PK-like) 119 411 IPR011009 -
Rops6g01827 439 ProSitePatterns Serine/Threonine protein kinases active-site signature. 260 272 IPR008271 GO:0004672|GO:0006468
Rops6g01827 439 FunFam Receptor-like serine/threonine-protein kinase ALE2 214 430 - -
Rops6g01827 439 Pfam Protein tyrosine and serine/threonine kinase 142 411 IPR001245 GO:0004672|GO:0006468
Rops6g01827 439 ProSiteProfiles Protein kinase domain profile. 138 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g01827 439 Gene3D Phosphorylase Kinase; domain 1 111 213 - -
Rops6g01827 439 FunFam Serine/threonine-protein kinase PBS1 106 213 - -
Rops6g01827 439 MobiDBLite consensus disorder prediction 420 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01827 Rops-Chr6 36017719 36020973 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g01827 37 437 Receptor kinase-like Gene Family AT3G58690 55.122 6.33e-153 437
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Rops6g01827 PK_Tyr_Ser-Thr 5.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01827 - - gmx:100499645 707.597