Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01803 ATGGCTGGGAGTAACCAACTTAACCCCAACGACTCTAAGATGGTGGTTCCGCTGAACATGTGGGTTCTGATCTCCAATTTCAAGTTAGCATACAATCTTCTTCGTCGTCCAGATGGCACTTTCAACCGTGACTTAGCAGAGTTCCTTGATCGGAAAGTTCCTTCAAATGCAAACCCTGTGGATGGAGTGTTCTCTTTTGATGTCATTGTAGACAAGGAAACTAATCTTCTGATTCGAATCTACCGTCCTGCTGAGGGAGAGGAACGCCAGGTGAACATTGTTGACCTTGAGAAGCCTGTGAGTTCTGATGTTGTTCCTGTTCTCATATTCTTTCATGGTGGAAGTTTTGCACATTCTTCAGCTAACAGTGCTATATATGACACCCTGTGTCGTCGTTTGGTGGGTATATGTAAGGCTGTTGTTGTCTCTGTGAATTATAGGCGTGCACCTGAAAACAGGTATCCTTGTGCATATGAAGATGGGTGGACAGCTCTTAAATGGGTTAATTCTAGAACTTGGCTTCAGAGTAAGAAGGATAACAAAGTTCATATCTACATGGCTGGTGATAGTTCAGGTGGGAACATTGTGCATCATGTTGCATTGAGAGCACTGGATTCTGGAATTCAAGTATTGGGGAATATCCTGCTAAATCCCTTGTTTGGTGGGGAAGGAAGAACAGAGGCTGAAAAGCGTTTAGATGGAAGATATTTTGTTAGAGTTAAAGATAGAGACTGGTATTGGAGAGCTTTTCTTCCAGAAGGGGAAGATAGAGACCATCCTGCTTGTAACCCTTTTGGCCCAAGGGGTAGAAGCCTTGAAGGGGTTCCCTTTCCCAAGAGCCTTGTTGTGGTTGCTGGTTTGGACCTTGTTCAGGACTGGCAATTGGCTTATGCTAAAGGGCTTGAGAAGGCTGGCCAAAATGTGAAATTGCTATTCCTGGAGCAAGCAACCATTGGGTTTTACTTGCTGCCAAATAATGAACACTTCTCTCCTGTCATGGATGAGATAAAATATTTTGTCAGCTCTGACTGTTTGTAG 1038 0.4383 MAGSNQLNPNDSKMVVPLNMWVLISNFKLAYNLLRRPDGTFNRDLAEFLDRKVPSNANPVDGVFSFDVIVDKETNLLIRIYRPAEGEERQVNIVDLEKPVSSDVVPVLIFFHGGSFAHSSANSAIYDTLCRRLVGICKAVVVSVNYRRAPENRYPCAYEDGWTALKWVNSRTWLQSKKDNKVHIYMAGDSSGGNIVHHVALRALDSGIQVLGNILLNPLFGGEGRTEAEKRLDGRYFVRVKDRDWYWRAFLPEGEDRDHPACNPFGPRGRSLEGVPFPKSLVVVAGLDLVQDWQLAYAKGLEKAGQNVKLLFLEQATIGFYLLPNNEHFSPVMDEIKYFVSSDCL* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01803 345 Pfam alpha/beta hydrolase fold 108 321 IPR013094 GO:0016787
Rops6g01803 345 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 184 196 IPR033140 -
Rops6g01803 345 FunFam Gibberellin receptor GID1 1 342 - -
Rops6g01803 345 Gene3D alpha/beta hydrolase 1 342 IPR029058 -
Rops6g01803 345 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 108 124 IPR002168 GO:0016787
Rops6g01803 345 SUPERFAMILY alpha/beta-Hydrolases 33 337 IPR029058 -
Rops6g01803 345 PANTHER ARYLACETAMIDE DEACETYLASE 43 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01803 Rops-Chr6 35768663 35770917 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g01803 1 344 Carbohydrate Esterase AT3G05120 75.942 0.0 561
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01803 K14493 - gmx:100815161 657.907