Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01801 ATGGAGTGCAACAAGGACGAGGCTGTTAGGGCTAAGCAAATTGCTGAAAGTAGAATGCAAAGAGGCGAATTTGTAGAGGCACTCAAGTTTGCTACCAAGGCCAAAAGGCTGTATCCAGATGTTGAAAACATTACTCAGATCCTTACGGTTTGTGAGGTTCACAATGCTTCACGAAACAAACTCTCCGGGACTGACTTGGACTGGTATGCAATTCTTCAGGCTGAAGGATTGTCTGACGAAACAACCATAAAGAAACAGTACAGGAAGCTTGCGCTACTACTCCATCCTGATAAGAATAGATTTGCTGGTGCTGAAGCTGCTTTCAAGTTGATCGGGCAAGCCAATGGGGTGTTGAGTGACCCAACCAAACGATCTTTATATGACATTAAGTTTAGAGCCTCTGTGAAAACTGCAGCACCTAACACGTCATTCCATCACTCAAATGGGAATGTATTTGCAGCAAAACACAATGAAAATGTAACTAGAGTCTCTGTGAGAACTGTGGCGCATAAGACCTCATCCCATCACTCAAATGGGAATGTATTTGCAGCAAAGCATGATGCAAATGCAACACATCATCAGAAGAATCCTTATTCAGACCCCTCTAGCTGGAATGCCCATCAGCAAGCTGAACAACAGACATTTTGGACATCTTGCAGACATTGTAATACCAAGTACCAATACTGCACAATTTTTGTAAATGCAACCTTACAATGTAAAAAATGTTTGAAACCTTTTACAGCTCATGCTTTTGGGTACCAGGGTATCCCACCAGGAGTGTCGTGTACTATCCAGAAAGAGGCTCCAATGCATGGTCCGCCAAGACCAGTCTCTGAAAGTAAAGGTGGAAAGCCTCTTGGAGGACATGCAGATACGTTTGGCAGGTCACATCCTAAGTCTATGAAAAAATGTGCTGCTGGAGTTGGCAGGCAAGGTGAAAAGAGTAAAGATAGCGATGTTCCTGCTTCCAAAGGCATGGAGTCACAAACCTCAAAAAATGTTGGAAGTAAGAGAGTAAGGCAGTCAGCACCAGATTCAAGACAAAGTTTCAAAGCTGGAAATGGTGATGACAGGAAAGATGCCAATGTTCAAGAAAATGATGATCCTTCAAGATTCAATGCTAGGAAATCTTCCAGGCAAAAACATGTTTCATATGTGGAAACCCCTGAAGATAACGATTTTGAGATTCCTTCCAAAAAGCCACGACATAACGAATCATTTAGCACCAATGAAGCTGAGAAGAAGAACGTGCCTGCAAGTGGCGGGACCTCCAATAACAATAATCCAGCTAGTAATGCTGCTGAGGTGGTTGATCAGAACAGAGAGGTGAGAAATAAAACAAGTAGTCCACCTGAAGAAACATTTTCAAGGAATAAAAGCAAAGTTGAACAATATCATGTTCAAGGAGAGAAGGTAATGGAGTCATATCTTGATCTTAGAAAGTCAAAAGACCATAACTGCTCCCCATTGAATTCAAATGTCCCTTCTGGTCCAGAGATCATTCATTGTCCTGATACAGATTTCAATGATTTTGAGAAGGATAAGATGGAGGATTCTTTTGATGTTAATCAATTCTGGGCAATTTATGATCCCAGTGATGCTATGCCAAGATTTTATGCTCTTGTCAAGAAAGTGGCCTCCCCTTTCAAGTTGCAGATTACTTGGTTGGAACCTGACCCAGATGACCAAGGTGAGATTGGTTGGCATGATGCAGACTTGCCTATTGCTTGCGGTAAGTTCAAACTTGGTGGTTCTCAGAAAATTACAGATCGTACTATGTTCTCTCATCAGATGCAGTGCATAAAAGGAAGTGGCAAAGGTTCTTATCTGGTATATCCTAAGAAGGGAGAAACTTGGGCAATTTTCAGAGATTGGAATATCAAATGGAGTTCTAATCCAGAAAATTATTTGAAGTATGAATTTGAATATGTGGAAATCCTATCAGATTTTTCTGACAATGTGGGCATTGAAGTTGCTTACCTGGACAAAGTGCAAGGCTTTATTAGCCTCTTTCAGAAAACTAAGAATGGAGTGAACATATTTCGTGTTCTACCTAATGAGCTATATAGGTTCTCACATCGAGTTCCTTCATACAAGATGAATGGTAATGAAAGGGAAGGGGTCCCAAGAGGATCTTTTGAACTTGATCCTGCTGCCCTGCCTAATAACTTCTTTGAAGTTGGTGACTCTGGTGACGTGAAGATGGTCAATGGAAAGTTAAACACTGGGGTGGAGCAGGTGATGGTTAACGAGAGCAAATGA 2262 0.4151 MECNKDEAVRAKQIAESRMQRGEFVEALKFATKAKRLYPDVENITQILTVCEVHNASRNKLSGTDLDWYAILQAEGLSDETTIKKQYRKLALLLHPDKNRFAGAEAAFKLIGQANGVLSDPTKRSLYDIKFRASVKTAAPNTSFHHSNGNVFAAKHNENVTRVSVRTVAHKTSSHHSNGNVFAAKHDANATHHQKNPYSDPSSWNAHQQAEQQTFWTSCRHCNTKYQYCTIFVNATLQCKKCLKPFTAHAFGYQGIPPGVSCTIQKEAPMHGPPRPVSESKGGKPLGGHADTFGRSHPKSMKKCAAGVGRQGEKSKDSDVPASKGMESQTSKNVGSKRVRQSAPDSRQSFKAGNGDDRKDANVQENDDPSRFNARKSSRQKHVSYVETPEDNDFEIPSKKPRHNESFSTNEAEKKNVPASGGTSNNNNPASNAAEVVDQNREVRNKTSSPPEETFSRNKSKVEQYHVQGEKVMESYLDLRKSKDHNCSPLNSNVPSGPEIIHCPDTDFNDFEKDKMEDSFDVNQFWAIYDPSDAMPRFYALVKKVASPFKLQITWLEPDPDDQGEIGWHDADLPIACGKFKLGGSQKITDRTMFSHQMQCIKGSGKGSYLVYPKKGETWAIFRDWNIKWSSNPENYLKYEFEYVEILSDFSDNVGIEVAYLDKVQGFISLFQKTKNGVNIFRVLPNELYRFSHRVPSYKMNGNEREGVPRGSFELDPAALPNNFFEVGDSGDVKMVNGKLNTGVEQVMVNESK* 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01801 753 PRINTS DnaJ domain signature 103 123 IPR001623 -
Rops6g01801 753 PRINTS DnaJ domain signature 69 87 IPR001623 -
Rops6g01801 753 PRINTS DnaJ domain signature 87 102 IPR001623 -
Rops6g01801 753 MobiDBLite consensus disorder prediction 322 349 - -
Rops6g01801 753 CDD DnaJ 67 120 IPR001623 -
Rops6g01801 753 Gene3D DnaJ domain 65 178 IPR036869 -
Rops6g01801 753 Pfam Domain of unknown function (DUF3444) 499 704 IPR024593 -
Rops6g01801 753 SMART dnaj_3 66 123 IPR001623 -
Rops6g01801 753 MobiDBLite consensus disorder prediction 265 462 - -
Rops6g01801 753 Pfam DnaJ domain 67 128 IPR001623 -
Rops6g01801 753 MobiDBLite consensus disorder prediction 411 435 - -
Rops6g01801 753 MobiDBLite consensus disorder prediction 351 410 - -
Rops6g01801 753 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Rops6g01801 753 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN-RELATED 1 728 - -
Rops6g01801 753 SUPERFAMILY Chaperone J-domain 62 133 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01801 Rops-Chr6 35764448 35767558 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g01801 4 128 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 43.511 2.29e-21 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01801 - - aprc:113873604 998.423