Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01797 ATGTTATCTACTTCCGACCATGCCTCGGTAGTTTCCATGAACTTATTTGTGGCACTTCTATGTGCCTGTATTGTCATTGGCCATCTTCTTGAGGAGAATCGGTGGATGAATGAGTCTATCACTGCCCTTTTGATTGGTGTTTGCACTGGCGTGGTCATTTTGTTGTTTAGTGGTGGTAAAAGCTCGCATATTCTTGTTTTCAGCGAAGATCTTTTCTTTATATACCTTCTGCCGCCTATAATATTTAATGCCGGGTTTCAGGTGAAAAAGAAGAAGTTTTTTGTTAACTTCATGACCATCATGATGTTTGGTGCTATCGGTACATTAATATCTTGTACCGTCATAACTTTGGGTGTTACACAAGTTTTTAAGAGGCTGGATATTGGTCCACTGGAAATAGGAGATTATCTAGCAATTGGTGCAATATTTGCTGCGACAGATTCTGTTTGCACATTGCAGGTGTTAAATCAGGATGAGACACCGTTGCTGTACAGTCTTGTATTCGGGGAAGGTGTTGTTAATGATGCTACATCAGTGGTGCTTTTCAATGCAATCCAGAGCTTTGACCTCAACCAAATTGACCCTTCAATTGCTTTGCACTTTTTGGGCAACTTCTTGTATCTGTTTATCACAAGCACATTGCTTGGGGTTTTGACAGGTCTACTTAGTGCGTACGTTATTAAAAAGCTGTACATTGGCAGGCACTCTACAGATCGTGAAGTTGCTCTTATGATGCTAATGGCATACCTTTCCTACATGCTGGCTGAATTAACCTATCTGAGTGGCATTCTGACTGTATTCTTTTGTGGGATTGTTATGTCTCATTATACTTGGCATAATGTGACTGAGAGCTCAAGAATCACTACCAAGCATGCTTTTGCTACCTTGTCGTTTGTTGCTGAGATATTTATCTTCCTTTATGTTGGTATGGATGCCCTGGACATTGAAAAATGGAGGTTTGTTAGTGATAGCCCTGGAACATCTGTAGCAGCAAGTTCTGTATTATTGGGTCTAATACTTGTTGGCAGAGCAGCTTTTGTTTTCCCCTTATCCTTCTTATCCAACTTGGCTAAAAAATCATCAAGTGATAAGATCACCTTCAGAGAGCAAGTGATCATTTGGTGGGCTGGTCTTATGAGAGGTGCTGTCTCAATGGCACTTGCTTATAATCAGTTCACCATGTCGGGGCATACTCAACTGCGCTGCAATGCATTCATGATCACTAGCACCATCACTGTTGTGCTTGTCAGCACAGTGGTGTTTGGTTTGATGACTAAGCCGCTCATAAGGCTTCTACTACCTCATCCTAAAGTCACAACCAGCATGATAAGCACAGATCCATCAACTCCAAAATCAGTTATTGTCCCACTTCTAGGAAATGCCCAAGATTCTGAAGCCGATCTTGATGGCCATGAAATTCATCGTCCAAGCAGCCTTCGTGCCTTACTAAGCACTCCAACACACACTGTTCATCGTTTATGGCGTAAGTTCGATGACTCGTTCATGCGTCCCGTTTTTGGTGGCAGGGGTTTTGTTCCTGTAGAACCTGTCTCACCAACTGAACGCAATGGTCAACAATGGCATTGA 1587 0.4222 MLSTSDHASVVSMNLFVALLCACIVIGHLLEENRWMNESITALLIGVCTGVVILLFSGGKSSHILVFSEDLFFIYLLPPIIFNAGFQVKKKKFFVNFMTIMMFGAIGTLISCTVITLGVTQVFKRLDIGPLEIGDYLAIGAIFAATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLFNAIQSFDLNQIDPSIALHFLGNFLYLFITSTLLGVLTGLLSAYVIKKLYIGRHSTDREVALMMLMAYLSYMLAELTYLSGILTVFFCGIVMSHYTWHNVTESSRITTKHAFATLSFVAEIFIFLYVGMDALDIEKWRFVSDSPGTSVAASSVLLGLILVGRAAFVFPLSFLSNLAKKSSSDKITFREQVIIWWAGLMRGAVSMALAYNQFTMSGHTQLRCNAFMITSTITVVLVSTVVFGLMTKPLIRLLLPHPKVTTSMISTDPSTPKSVIVPLLGNAQDSEADLDGHEIHRPSSLRALLSTPTHTVHRLWRKFDDSFMRPVFGGRGFVPVEPVSPTERNGQQWH* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01797 528 PRINTS Na+/H+ exchanger signature 140 150 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Rops6g01797 528 PRINTS Na+/H+ exchanger signature 71 82 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Rops6g01797 528 PRINTS Na+/H+ exchanger signature 100 108 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Rops6g01797 528 PRINTS Na+/H+ exchanger signature 85 99 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Rops6g01797 528 PANTHER SODIUM/HYDROGEN EXCHANGER 4 506 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Rops6g01797 528 Pfam Sodium/hydrogen exchanger family 17 429 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Rops6g01797 528 Gene3D - 133 184 - -
Rops6g01797 528 NCBIfam sodium/hydrogen exchanger 3 12 432 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01797 Rops-Chr6 35703276 35709636 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g01797 2 526 Antiporters AT3G05030 78.450 0.0 843
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01797 - - gmx:732573 916.376
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g01797 6 35703276 35709636 Rops6g01797 6 35703276 35709636 ECH
Rops8g04049 8 82049234 82055115 Rops6g01797 6 35703276 35709636 PCT