Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01793 ATGCAACACAAACCCACTCCGTTGAAGAACCATCAAAACCCACCACCAAGGAAGATGATGAGTGATGGAGAAACCACCGCGACTTTGGAACGGTCCCTGCGGTTGGATCTCGTCCTAGCACCACCTCCGTCGTGGTTGGATCTCATCCCAGCAAACTCGTCGGACCACCACCGCGACTTTGGAACGATCATCGGAGGGGGTGGTGGAGGCGGTGTTGGTGTGGTGGTGATCGTGGTGGAGGCAAGAGAAGAGCAGGTTCTGTTGCCTTCAGAAAATGCAAGTGAGGTTTCAAAGTCACCCTCATTGGATTTGAACCCAGATTCTGTTGATGGGTCACCACCGGTTTCCACAGATTACACTGATGTGGGTGTGGTGCCAGAGCATGAAAAGGACGAGCTTGAGAACTTGATATCAAATTTAGAAAGAGAAGTTGGGGAGCTGAGGCTCAAGCAAAGGATGTGGGATGAAAAGCGGAGAGAAGCATTGAGTAAGATATTGGACATCAAAGGGAGCATTCGAGTATTTTGTAGAATTCGACCGATTCTGATAGCGGACAAGAGAAGAAATTCTGAACCTGTATCAGCTGGATCAGAGAGAATTCAGGTTAAGTTGGGAGGAACAAGGAAAGATTTTGAGTTTGATAAGGTTTTTCCTCAAGAAGCAAGCCAAGAAAGTGTTTTTGTTGAGGTTGAGCCAATTATAAGATCTGCAATGGACGGGCACAATGTGTGTATTTTTGCTTATGGTCAAACAGGCACAGGCAAAACTTTCACCATGGATGGTACAAATGAGCAGGCAGGAATCATTCCCCGTGCTCTTGAAGAGCTCTTTCATCAAGCATCCATGGATAATTCATCTTCTTTTACTTTTTCAATGAGCATGTTGGAAGTTTACATGGGCAGTGTCAGGGATTTGCTGGCTCCAAGAGCATCTGGTAGACCACATGAACCTGTGACAAAATGCAATCTCAACATCCAAACAGATCCAAAGGGATTGGTTGAAATTGAGGGTCTCACAGAGGTGCAATTTTCTGATTATGCTAAAGCCAGATGGTGGTACAACAAGGGCAGAAGGTTCAGATCCACCTCGTGGACTAATGTCAATGAGGCATCAAGCAGGTCACACTGCTTGACAAGGATAAGCATATTTAGACGTGGGGATGCATTGGAAGCAAAAAGCGAAATAAGTAAATTGTGGATGGTTGATCTTGGAGGCAGTGAACGGTTGCTAAAAACCGGAGCTAAAGGACTAACACTTGATGAGGGTCGAGCTATTAATCTTTCTCTTTCAGCTTTAGCTGATGTCATTGCAGCTTTGAAGAGGAAGAGGTGTCATGTGCCTTACAGAAATAGCAAGCTGACCCAAATACTTAGAGATTCTCTCGGTGATGGCTCAAAGGTGTTGATGCTCGTACATATAAGCCCTTCTGAAGAAGATGTTTGCGAGACAATTTGTTCTTTGAACTTTGCAAAGAGGGCGAGAGCAATAGAGTCCAGTAAAGAAGTACCAGTGGAATTGAAGAAGCAAAAGGAAAAGAAGATCATGGAGCTCGAAGAAGATATCAAGGAAGCTGAAAAGCAACGTCAGAATTTAAGGGATCAAATACAGAAGATTGAGTTGAATTTAAGCGAGAGTAAAATGCTCTTTTCAACCAAATATAGTCTCCTGGAAAGTGATGACATGCCAACATCTATTAGCCCCAAAGATGATGTCAAAGAAGTGATGGAAACCCCAAAAGCATCCAAGAAGTCCATTAAGAGAAATTTCTCTAATTCAGTGCCTCGATTCATGAATTCAACTGTTGCTAGTCGCCAAAGACAAAGTGCTGCAGAAAAGGAAATTGTTGGGAGATCAAAAAGTCTACGATCAGTGGTCACAAGAAGTTCAGTCCAGTTTTCATGTTCCCAATCATTAAGTTATTCAGATTTCCGCATCAAAGCAATATTGCGAAGTTCAACTGGAAAATCTCGGCATGCTGAAACAAATACTGTTATCTCAGAAAGGCCTAAATGCAATGAGTTGGAATCAAAAGTTGTAACTCCTCGAAGCAGGATGGTTACATCATCAGATCCAAACTTGAGAGTTACATTGTGTCGTCATAGAAGAAGGATGTCTGATCTGATCTAA 2127 0.433 MQHKPTPLKNHQNPPPRKMMSDGETTATLERSLRLDLVLAPPPSWLDLIPANSSDHHRDFGTIIGGGGGGGVGVVVIVVEAREEQVLLPSENASEVSKSPSLDLNPDSVDGSPPVSTDYTDVGVVPEHEKDELENLISNLEREVGELRLKQRMWDEKRREALSKILDIKGSIRVFCRIRPILIADKRRNSEPVSAGSERIQVKLGGTRKDFEFDKVFPQEASQESVFVEVEPIIRSAMDGHNVCIFAYGQTGTGKTFTMDGTNEQAGIIPRALEELFHQASMDNSSSFTFSMSMLEVYMGSVRDLLAPRASGRPHEPVTKCNLNIQTDPKGLVEIEGLTEVQFSDYAKARWWYNKGRRFRSTSWTNVNEASSRSHCLTRISIFRRGDALEAKSEISKLWMVDLGGSERLLKTGAKGLTLDEGRAINLSLSALADVIAALKRKRCHVPYRNSKLTQILRDSLGDGSKVLMLVHISPSEEDVCETICSLNFAKRARAIESSKEVPVELKKQKEKKIMELEEDIKEAEKQRQNLRDQIQKIELNLSESKMLFSTKYSLLESDDMPTSISPKDDVKEVMETPKASKKSIKRNFSNSVPRFMNSTVASRQRQSAAEKEIVGRSKSLRSVVTRSSVQFSCSQSLSYSDFRIKAILRSSTGKSRHAETNTVISERPKCNELESKVVTPRSRMVTSSDPNLRVTLCRHRRRMSDLI* 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01793 708 MobiDBLite consensus disorder prediction 90 114 - -
Rops6g01793 708 SMART kinesin_4 169 504 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops6g01793 708 FunFam p-loop containing nucleoside triphosphate hydrolase superfamily protein 124 498 - -
Rops6g01793 708 Coils Coil 507 548 - -
Rops6g01793 708 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 171 536 IPR027417 -
Rops6g01793 708 MobiDBLite consensus disorder prediction 1 27 - -
Rops6g01793 708 ProSiteProfiles Kinesin motor domain profile. 171 496 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops6g01793 708 PANTHER KINESIN-LIKE PROTEIN KLP-3 130 635 IPR027640 GO:0003777|GO:0007018
Rops6g01793 708 Pfam Kinesin motor domain 197 496 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops6g01793 708 Coils Coil 130 150 - -
Rops6g01793 708 Gene3D Kinesin motor domain 166 541 IPR036961 -
Rops6g01793 708 PRINTS Kinesin heavy chain signature 446 467 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops6g01793 708 PRINTS Kinesin heavy chain signature 240 261 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops6g01793 708 PRINTS Kinesin heavy chain signature 365 382 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops6g01793 708 PRINTS Kinesin heavy chain signature 397 415 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01793 Rops-Chr6 35637321 35643582 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g01793 143 508 Calmodulin-binding Proteins AT5G65930 40.106 4.71e-70 247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01793 - - gmx:100785581 1023.85