Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01792 ATGAGTGAGAGAGCGAAGAAGGAAAAGCCAACAGAGAAAAGAGAGAGGATGAAAAACATCTTCAAGAAGCTTCACAAAGGGAGCAACCATGATCCTCATCGATCCAATGAAATTCCGCCACCTCTACCATCGCCGTCATGCGCCGCCGAACACTCTCAAAATTCCGGCCCCTCTCCGGCCACTCCTTCTTCGTCATCGCCGTCCCCGGCACCTATCCCTCCCGGCGGTGGCGTCAATAGGCAAGACTTTTTCTCGTCGGAGGAGGAGTTTCAGATGCAGCTAGCCCTAGCCATCAGCGCTTCCAATTCGGAGTTCCGTGATGATCCCGAGAAGGATCAGATCCATGCGGCGACGCTGCTGAGTTTGGGAGGACATCGAATCGATTCGACGAGGAACAAGGATGACGTGGCGGAGGCGCTGTCTAGGCAGTACTGGGAATACAATGTGCTTGACTATGAGGAGAAAGTTGTAGATGGTTTTTATGATGTATATGGGCTCTATAATGATTCGGCAATGCAAGGAAAGATGCCATCTCTAGCAGATCTTGAAGCAAATCCTGGAGGTTCCAGCTTTGAAGTGGTCATAGTTAATCAAAAAATTGATCCTGCCCTGGAAGAGCTGGTCCAAATTGCACATTGTATTGCATTAGACTGCCCTGTCACGGAGATTGGTATTTTGGTGCAAAGGCTTGCTGAGCTTGTTACAAACCATATGGGTGGTCCTGTAAAGGATGCTAATATTATATTGGCAAGATGGACAGAAACAAGTACAGAGTTGAGGACATCTCTTCACACAAGTGTATTGCCTCTTGGGTCCTTAAATATTGGGCTCTCTAGGCATCGTGCTTTGCTTTTCAAGGTATTGGCTGACAACATTAAGATGCCTTGTAGACTGGTAAAAGGTAGTCATTACACTGGTGTTGAGGATGACGCTGTCAACATTATTAAGTTGGAGGATGAAAGGGAGTTTTTAGTTGATCTCATGGCTGCTCCTGGAACACTTATCCCAGCTGATATTTTAAATACAAAGGATAATGCCTTTAAGTCTTACAATCCCAAGATTGTGCCAAGTTTGCCTTCCACTGAGGAAACTGAATTTTCTTACTCAAGACCTATCCCACCATCTTATGGTGAAGGTAGTAGCCGAACTTCTGTGATAAAAGATCATTCACCACCCTGGAATGGAAAATCATACACTGAGAAGTCAGGGTATATGCCTTCAAACATCGGTTTGAGCAAAGACACTGGCGTTGGTCCTTCTAAAATTCCTAATAGAGGGACTCCTAACCAACCGGAAAATTTGCAACCCTCATACGGTACTTCTCTGTACAAAGGGACTCTTGGAATGAATACAGTTGGTGATGGGACAAGATTGAATGTCAATGTTGTACCATATGCCCAGAACAAACCCAACGACTCTCAGAACCTTTTTGCAGATCTTAACCCATTCCTTTTAAAAGGGACTGGGAAGCCCCCTGTGCATAATAAACCTGTGGAAAGTAAACCTCCTGAGCTTCAAAGTACAAAAAACAATACTGTTTCTGGTCTACCCGTGGCACCACTGATGTGGAAGAATCGCCATGCTCACAACCAGATCCCCAGGAAAACTAATCATAACCCTAATGAATATAACCCTCCTTTATTTGTTTCCAATATTCCTTCTGCATCTGAAAATACCGATCTCCGCAAATCATTATACAATTTAAGTGTAAATAATGATATAAATACTTCAACTTTGGCGCAAGTTACTGGTTCAGTCTCACCAGCTGGTGCAGGTGAACCGAACCGGATTGAGGATCTCAATGCTGATTTTAACAAGGGGGATTTGGAAAATTCTCAAAATGTCATGGTAGAGGCAGTCAAAGAACCTGAAAACATTGAAATCAGACATCATGATCGAAGGAAGTGCACACATGACAGATTCATGGGAAACAATTTAAAATTAAAAGATCCAGAGAGTCCTAGCTCTTCAATTGATTCCATTACAAACAGGGTTGATCAAATATTGGATGATGTCGATGTTGGTGAATGTGAGATTCCATGGGAGGATCTGGTTATTGGTGAAAGAATTGGTCTAGGTTCATATGGTGAGGTATACCGTGCGGACTGGAATGGCACAGAGGTTGCTGTGAAGAAATTTTTGGATCAGGATTTTTCAGGCGCAGCCTTGTCTGAATTCAAAAGAGAAGTACGGATAATGCGTAGGCTGCGTCATCCAAATGTTGTTCTTTTCATGGGTGCTGTTACTCGGCCTCCCAATCTCTCAATCATTTCAGAGTTTCTTCCAAGAGGAAGCTTGTACCGTCTTCTTCATCGCCCTAATTGTCAGATTGATGAGAAACAAAGAATAAAAATGGCTCTGGATGTGGCTAGGGGCATGAATTGCTTACACATCAGCACACCAACAATAGTTCACCGAGATCTGAAGTCTCCAAATCTTTTGGTTGATAAGAACTGGAACGTGAAGGTATGTGATTTTGGGTTGTCACGCTTGAAGCACAACACATTTTTGTCATCCAAATCAACTGCTGGAACGCCGGAATGGATGGCTCCTGAAGTTCTCCGCAATGAGCCCTCAAATGAGAAGTGTGATGTTTATAGTTTTGGAGTCATCCTATGGGAGCTTGCTACTCAAAGGTTGCCGTGGACTGGAATGAATCCTATGCAAGTTGTTGGTGCCGTAGGTTTTCAAAATCGACGACTTGAAATTCCTAAGGAAGTTGATCCTTTAGTTGCCGGAATAATCTGGGAATGTTGGCAACAGGATCCAAATTTGCGCCCCTCGTTTGCACAGCTCACAGTGGCTCTAAAGCCCCTGCAGCGTCTGGTTATCCCATCTCATCAAGACCAGGTAGCTCCACCTCTGCCGCAGGAGATTTCTGTAAATTCTACCCCATGA 2898 0.442 MSERAKKEKPTEKRERMKNIFKKLHKGSNHDPHRSNEIPPPLPSPSCAAEHSQNSGPSPATPSSSSPSPAPIPPGGGVNRQDFFSSEEEFQMQLALAISASNSEFRDDPEKDQIHAATLLSLGGHRIDSTRNKDDVAEALSRQYWEYNVLDYEEKVVDGFYDVYGLYNDSAMQGKMPSLADLEANPGGSSFEVVIVNQKIDPALEELVQIAHCIALDCPVTEIGILVQRLAELVTNHMGGPVKDANIILARWTETSTELRTSLHTSVLPLGSLNIGLSRHRALLFKVLADNIKMPCRLVKGSHYTGVEDDAVNIIKLEDEREFLVDLMAAPGTLIPADILNTKDNAFKSYNPKIVPSLPSTEETEFSYSRPIPPSYGEGSSRTSVIKDHSPPWNGKSYTEKSGYMPSNIGLSKDTGVGPSKIPNRGTPNQPENLQPSYGTSLYKGTLGMNTVGDGTRLNVNVVPYAQNKPNDSQNLFADLNPFLLKGTGKPPVHNKPVESKPPELQSTKNNTVSGLPVAPLMWKNRHAHNQIPRKTNHNPNEYNPPLFVSNIPSASENTDLRKSLYNLSVNNDINTSTLAQVTGSVSPAGAGEPNRIEDLNADFNKGDLENSQNVMVEAVKEPENIEIRHHDRRKCTHDRFMGNNLKLKDPESPSSSIDSITNRVDQILDDVDVGECEIPWEDLVIGERIGLGSYGEVYRADWNGTEVAVKKFLDQDFSGAALSEFKREVRIMRRLRHPNVVLFMGAVTRPPNLSIISEFLPRGSLYRLLHRPNCQIDEKQRIKMALDVARGMNCLHISTPTIVHRDLKSPNLLVDKNWNVKVCDFGLSRLKHNTFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATQRLPWTGMNPMQVVGAVGFQNRRLEIPKEVDPLVAGIIWECWQQDPNLRPSFAQLTVALKPLQRLVIPSHQDQVAPPLPQEISVNSTP* 966
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01792 965 MobiDBLite consensus disorder prediction 360 409 - -
Rops6g01792 965 ProSitePatterns Protein kinases ATP-binding region signature. 690 712 IPR017441 GO:0005524
Rops6g01792 965 ProSitePatterns Serine/Threonine protein kinases active-site signature. 803 815 IPR008271 GO:0004672|GO:0006468
Rops6g01792 965 MobiDBLite consensus disorder prediction 488 512 - -
Rops6g01792 965 MobiDBLite consensus disorder prediction 1 33 - -
Rops6g01792 965 Gene3D Transferase(Phosphotransferase) domain 1 763 945 - -
Rops6g01792 965 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 153 940 - -
Rops6g01792 965 Pfam Ethylene-responsive protein kinase Le-CTR1 137 335 - -
Rops6g01792 965 MobiDBLite consensus disorder prediction 47 61 - -
Rops6g01792 965 MobiDBLite consensus disorder prediction 422 438 - -
Rops6g01792 965 FunFam Serine/threonine-protein kinase isoform 1 675 762 - -
Rops6g01792 965 SMART serkin_6 684 939 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g01792 965 MobiDBLite consensus disorder prediction 360 438 - -
Rops6g01792 965 CDD STKc_MAP3K-like 690 933 - -
Rops6g01792 965 FunFam PAS domain-containing protein tyrosine kinase family protein 762 952 - -
Rops6g01792 965 PRINTS Tyrosine kinase catalytic domain signature 907 929 IPR001245 GO:0004672|GO:0006468
Rops6g01792 965 PRINTS Tyrosine kinase catalytic domain signature 797 815 IPR001245 GO:0004672|GO:0006468
Rops6g01792 965 PRINTS Tyrosine kinase catalytic domain signature 863 885 IPR001245 GO:0004672|GO:0006468
Rops6g01792 965 PRINTS Tyrosine kinase catalytic domain signature 758 771 IPR001245 GO:0004672|GO:0006468
Rops6g01792 965 PRINTS Tyrosine kinase catalytic domain signature 844 854 IPR001245 GO:0004672|GO:0006468
Rops6g01792 965 MobiDBLite consensus disorder prediction 1 82 - -
Rops6g01792 965 Gene3D Phosphorylase Kinase; domain 1 677 761 - -
Rops6g01792 965 ProSiteProfiles Protein kinase domain profile. 684 943 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g01792 965 Pfam Protein tyrosine and serine/threonine kinase 685 934 IPR001245 GO:0004672|GO:0006468
Rops6g01792 965 SUPERFAMILY Protein kinase-like (PK-like) 674 956 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01792 Rops-Chr6 35622052 35630299 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g01792 17 920 MAP Kinase Kinase Kinase AT1G08720 55.424 0.0 932
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Rops6g01792 PK_Tyr_Ser-Thr 1.3e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01792 - - aprc:113870732 1653.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g01792 6 35622052 35630299 Rops6g01792 6 35622052 35630299 ECH
Rops6g01792 6 35622052 35630299 Rops8g03179 8 69876690 69878397 PCT