Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01787 ATGGCCTTCTCTGACAACTTAGAACCATTATCTCCCTCTCTGGTGTTTTCAGTGCGGAGGAGGGAACCGGAGCTGGTGGCTCCAGCTGTGTCCACGCCCCATGAAATTAAGCTGTTATCTGACATAGATGATCAAGCTGGTCTGCGTGCCAATCTTCCCATCATACAGTTCTATCGTAATGAGCCATCAATGGCAGGGAAGGACCCAGTTGAAGTCATTAGAAACGCTCTCGCACAAGCGCTCGTTTTCTACTACCCACTTGCAGGTAGGCTTAGGGAAGCTCCTGGTGGCAAACTCATTGTGGATTGTAACGAGGAGGGAGTGATGTTCATCGAGGCCGATGCAGACGTCACACTTGACCAATTTGGTGACAGTCTCAAACCTCCCTTTCCATGCTTCCAAGAACTCCTTTACGAGATTCCAGGTTCAGAAGGAGTTGTTAACAGTCCCATTCTACTTATACAGGTTACAAGACTCAAGTGTGGTGGTTTCATCTTAGCTCTCCGCTTTAACCACGCCATGACAGATGGAGCTGGCATAGTTCATTTCATGTATGCCATGGTAGAAATAGCTCGAGGTGCAAAAGAACCTTCAATTCAACCCGTATGGCGTAGGGAGCTTCTATGTGCTAGGGATCCACCACGTGTCACATGCAACCACCGCGAATACGACCAACTAACCGACACCAGTATCGTGGTTCCATCAGAAGAAGACTTGGAACAACAATCTTTCTTCTTCGGACCCACCGAGATAGCCGCCATCCGTGGCTTACTTCCCAATAATCTCAACGAAAACACCACCACATTCGAAGTCCTCACATCATACGTATGGCGTTGCCGCACGAAAGCGTTGCAGTCAGACCCAAAAGAAAAGGTTAGAATGATGTGTATTACAGACGCACGTGATAAGTTCAACCCTCCCTTCCCAGCTGGTTACTACGGAAGCTGTTTTGCGTTTCCAGCAGCAATAGCCACAGCTGGAGAGCTTTGTGAAAATCCACTTGAGTTTGCAGTGAAGTTAATAAAGAGAGCAGCTAGTGAGGTGAGTGAAGAGTATATGCACTCTCTGGCAGATCTAATGGTAACTCAAGGGCGACCACTTTTTACTGTGGTAAGATCATTTGTTGTGTTGGATACAACAGATGCAGGATTTAGAGGATTGGATTTTGGATGGGGCAATGCGTTATATGGTGGAGTGGCTAAAGCTGGTGCAGGGGCATTTCCTGCGGTGAATTTTCATGTTCCAGCTCAGAATGCAAAAGGGGAGGAAGGTATATTGGTTTTGACTTGCTTGCCTGCACAAGTTATGAAAGTGTTTGCCAAAGAGTTGGATGACATGCTTCATAGCAACAAGACAAATTAA 1362 0.4684 MAFSDNLEPLSPSLVFSVRRREPELVAPAVSTPHEIKLLSDIDDQAGLRANLPIIQFYRNEPSMAGKDPVEVIRNALAQALVFYYPLAGRLREAPGGKLIVDCNEEGVMFIEADADVTLDQFGDSLKPPFPCFQELLYEIPGSEGVVNSPILLIQVTRLKCGGFILALRFNHAMTDGAGIVHFMYAMVEIARGAKEPSIQPVWRRELLCARDPPRVTCNHREYDQLTDTSIVVPSEEDLEQQSFFFGPTEIAAIRGLLPNNLNENTTTFEVLTSYVWRCRTKALQSDPKEKVRMMCITDARDKFNPPFPAGYYGSCFAFPAAIATAGELCENPLEFAVKLIKRAASEVSEEYMHSLADLMVTQGRPLFTVVRSFVVLDTTDAGFRGLDFGWGNALYGGVAKAGAGAFPAVNFHVPAQNAKGEEGILVLTCLPAQVMKVFAKELDDMLHSNKTN* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01787 453 Gene3D - 225 443 IPR023213 -
Rops6g01787 453 PANTHER ACYL TRANSFERASE 4 16 448 - -
Rops6g01787 453 Gene3D - 17 224 IPR023213 -
Rops6g01787 453 Pfam Transferase family 17 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01787 Rops-Chr6 35517835 35519973 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g01787 21 443 Monolignol Biosynthesis Gene Families AT5G48930 30.159 2.67e-52 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01787 K19861 - gmx:100820325 672.159