Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01778 ATGGCATCCGACCTAAACGACGTCGTTTTTCGCGAAGAAGATCTCGACGACGATGACGAAACGCAAGAGGATGAAGAAGAGGAGGACGAAGACGACGACGTTTTAGGTGAACCCGAAGACTACGAAGAAACCGAACCTTCTCCTTCCACCTCCTCCGCCATCGCTGCCGTAACCTTAGCCGTTCCCGGCTCCGCCGTCTCAAACACGTCAACGCCTGGGGCCGAAATCGTAGTCACCAATTCCTCAGAACCAAAACGGCAGCGTACGGAGCAAATGGAAGAGAAGAAAGCGTTGGAAGATTCACGAAGACTGTTCCAGCGTCTATGGACGGACGAGGACGAGATTGAGCTCTTGCAAGGGTTCCTTGAGTACACAGCACGACGAGGATCCTCTCACCACAACGACACCGCTTTGTTCTACGACCAAATCAAGTCGAAGCTTCAACTCGGTTTCAACAAGAATCAGCTCGTCGAGAAGCTTCGGAGGTTGAAGAAGAAGTACCGTAACAAGATCGGTTCTGGCAAGGAGTTTTCCTTCAAGAGCCCTCACGATCAAGCCACCTTCGAAATCTCCCGCAAGATCTGGAGCAACACGCCTCCAATTGCTGGTCCCGTCGAAGATGACGACGAAATCAGCCCTAACCCTAATTCCGGTTATTCAATCGAGAAGAGAACCCCGCCGTCGCGGAAACGGTCGCGGTCTCGATCGGAGAAGCGCGAGTTCAACGATTGTTCAGCGTTGAATAATAATAATAATAATAATAATAATTGTAACGATAGGCATAGCATACAGGGTTTGATTGAAGAGACGGTGAAGAGTAGTTTGTCGCCGGTGTTGAAGGAGTTGATGAATTGTGCCATGGGAAACCCTTTTGGTTTTGGGGGGAGAGGGTTTGCATTGAATCCATTGCCCTTGAGTTTCTTGAATTTGGGGAGTGGAGAAATGGTGGTGGATGAAAAATGGAGGAAACAACAGATTTTGGAGCTGGAAGTGTACTCAAAGCGTTTGGAGCTGGTGCAGGGTGAGATCAAGGTAGCTTTGAAGGAGTTGCGATCAGCTGGGGCTGGAGGAGGAGGATGA 1080 0.4991 MASDLNDVVFREEDLDDDDETQEDEEEEDEDDDVLGEPEDYEETEPSPSTSSAIAAVTLAVPGSAVSNTSTPGAEIVVTNSSEPKRQRTEQMEEKKALEDSRRLFQRLWTDEDEIELLQGFLEYTARRGSSHHNDTALFYDQIKSKLQLGFNKNQLVEKLRRLKKKYRNKIGSGKEFSFKSPHDQATFEISRKIWSNTPPIAGPVEDDDEISPNPNSGYSIEKRTPPSRKRSRSRSEKREFNDCSALNNNNNNNNNCNDRHSIQGLIEETVKSSLSPVLKELMNCAMGNPFGFGGRGFALNPLPLSFLNLGSGEMVVDEKWRKQQILELEVYSKRLELVQGEIKVALKELRSAGAGGGG* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01778 359 MobiDBLite consensus disorder prediction 1 97 - -
Rops6g01778 359 MobiDBLite consensus disorder prediction 10 44 - -
Rops6g01778 359 MobiDBLite consensus disorder prediction 45 85 - -
Rops6g01778 359 MobiDBLite consensus disorder prediction 243 257 - -
Rops6g01778 359 Pfam Protein of unknown function, DUF573 105 196 IPR007592 GO:0006355
Rops6g01778 359 PANTHER BNAANNG10740D PROTEIN-RELATED 17 349 IPR007592 GO:0006355
Rops6g01778 359 MobiDBLite consensus disorder prediction 199 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01778 Rops-Chr6 35458419 35459842 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g01778 1 357 GeBP Transcription Factor Family AT5G28040 44.700 2.99e-88 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Rops6g01778 DUF573 1.2e-31 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01778 - - gmx:100817182 371.318