Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01774 ATGGCGGACAAGGCGGTTACGATCCGAACCAGAAAGTTCATGACTAATAGGCTTCTCTCGAGAAAGCAATTTGTCGTTGACGTGCTTCATCCTGGGAGGGCAAATGTGTCCAAGGCCGAGTTAAAGGAGAAACTGGCGAGAATGTATGATGTGAAGGACCCTAACAGTGTATTTGTCTTCAAGTTTCGAACTCATTTTGGAGGTGGCAAGTCCACTGGTTTTGGTTTGATTTATGATTCTGTTGAGAACGCAAAGAAGTATGAACCCAAGTACAGGCTTATCAGGAATGGACTTGATACCAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGAAAAAATAGAGCTAAGAAGATTCGTGGAGTAAAGAAGACCAAGGCTTCTGATGCTGCCAAGGCTGGAAAAAAGAAATGA 414 0.4324 MADKAVTIRTRKFMTNRLLSRKQFVVDVLHPGRANVSKAELKEKLARMYDVKDPNSVFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01774 137 Hamap 30S ribosomal protein S24e [rps24e]. 4 106 IPR001976 GO:0003735|GO:0005840|GO:0006412
Rops6g01774 137 Pfam Ribosomal protein S24e 25 103 IPR001976 GO:0003735|GO:0005840|GO:0006412
Rops6g01774 137 FunFam 40S ribosomal protein S24 1 137 - -
Rops6g01774 137 Gene3D - 1 132 - -
Rops6g01774 137 ProSitePatterns Ribosomal protein S24e signature. 66 88 IPR018098 -
Rops6g01774 137 PANTHER 40S RIBOSOMAL PROTEIN S24 1 131 IPR001976 GO:0003735|GO:0005840|GO:0006412
Rops6g01774 137 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 6 108 IPR012678 GO:0003735|GO:0005840|GO:0006412
Rops6g01774 137 MobiDBLite consensus disorder prediction 102 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01774 Rops-Chr6 35439039 35441136 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g01774 1 132 Cytoplasmic Ribosomal Protein Gene Family AT5G28060 87.121 4.08e-85 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01774 K02974 - pvy:116133712 241.891