Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01766 ATGGCGGATTCTTCAAAGGAGCAGAAGACACGGCTTTACCATCCCTATCAAGATCTCAACGTTCCGGTCCAAAAACTCTACAACCTCCCAACCTCGCCGGAGCACCTCTTCCCCGAAGAAGCCGCCAGGAAGCACCGTTCCTGGGGCGACAATCTCCAGTACTACACCGGCTCCGGCTACCTCTCCGGCGCCATCATCGGAGGTGTCAAGGGAACCGTCGAGGGACTCAGGGCTGCCGAGTCAGGCGACTCACTCAAGGTCCGAGTCAACCGAGTTCTTAACTCGGGTGGTCAGGGAGGTCGCAGGCTCGGGAACTCGATCGGTGTGCTGGGATTGATCTTTGCAGGCATGGAGAGCGCGATGATCCACTTCAGAGGCAGGGATGACTTGGTCAACAGCGCCGTCGCCGGACTTGGCACCGGGGCACTCTATAGGGCGGCGGCGGGGCCGCGATCCGCTGCTATTGCAGGTGCAATCGGAGGAATCGCCGCGGCGGCCGTAGTTGCCGGGAAGCAAGCTTTGAAACGACATGTTCCGATATAA 543 0.5967 MADSSKEQKTRLYHPYQDLNVPVQKLYNLPTSPEHLFPEEAARKHRSWGDNLQYYTGSGYLSGAIIGGVKGTVEGLRAAESGDSLKVRVNRVLNSGGQGGRRLGNSIGVLGLIFAGMESAMIHFRGRDDLVNSAVAGLGTGALYRAAAGPRSAAIAGAIGGIAAAAVVAGKQALKRHVPI* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01766 180 Pfam Tim17/Tim22/Tim23/Pmp24 family 54 162 - -
Rops6g01766 180 PANTHER TIM23 22 167 IPR045238 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01766 Rops-Chr6 35333071 35333613 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g01766 2 176 Chloroplast and Mitochondria Gene Families AT1G17530 55.932 2.44e-63 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01766 K17794 - gmx:100803835 267.7