Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01759 ATGGATAGGGTGTTCTCAGTGGATGAAATCTCCGATCACTTATGGTCACCGCCGATTCCCGTCGTCGGCGCCGACGAGTCCTCGAAGATGAGCCGCAGCGCCTCCGAGTGGGCCTTCCAGCGATTCCTCCAGGAAGCTTCGGCTTCCGCCGCCTCTCCCCCTTCTTCTTGCTCCGTCGCTGACGATGTCGTTTTTGTCAAGACCCAGGACCAAGCCATACCCAGCATCGACGCGGCACCCCTTCATACGAACGGCGCCGTTTTGCTCAATGGCCCTCCTCCTGTGCCTGTTGATTCCGAGGATTACAGGGAAATCCTAAAGAGCAAGCTCAATCTTGCATGTGCTGCTGTCGCCATGACTAGGGGATCTTTGGCTAAATCTCAAGATCCAGCCACTCTTCCTGACAGTGGATCACAGCCGTCTAATCCTTCTCAAATTGGATCTCAGCCCACTTTCAAAGGATCTAGTCCTTCTGGGAACGATTCATCTAAATTACAAGATAAAGAGACCAAAGTACCGGCTGGGATTCCTTCCATACCTACCATGCAAAAGAAACCTGCTGTTGTAGTTAGGCCATCAACAAGTGGATCATCAAGGGAACTGTCAGATGATGATGAAGCTGAGGGAGAGACAGAAATGAATGACAACATGGACCCTGCTGATGTAAAACGAGTAAGGAGGATGCTTTCCAATAGGGAGTCAGCCAGACGCTCAAGAAGAAGAAAACAGGCTCATTTAACTGAGCTGGAAACACAGGCCTCTGAATTAAGAGGTGAAAATTCTTCCTTGTTAAAGCGCCTTACTGATGTAAGCCAGAAATATGGTGATTCTGCTGTTGACAACCGAGTATTAAAAGCTGATGTTGAAACGTTAAGAGCAAAGGTGAAGATGGCTGAAGAGACCGTCAAAAGAATTACTGGGTTGAATCCAATGTTTAATGCCATGTCTGAGATATCATCAATGGGCATGCCATCATTTGATGGAAGCCCTTCAGACACTTCAGCTGATGCTGCTATTCCTACTGTGCAAGATGACCCACATCATCACTTCTATCAACCCACATCTAATAATCCCATGCCCAGTCATGATCTGAGAGTAAACAATGGGTTGGGGGATATTTCTTCAATTGAAAATGTGCAGCAGAACACTGCAGCAGTAGTAGGTGGGAACAAGATGGGTCAAGCAGCTTCTTCCCTGCAGCGGGTGGCTAGCTTGGAACATCTTCAGAAGCGGATTCGTGGTGGTGTGGATTCATGTGGACCTTCTAATAGAGAGCAGTGA 1281 0.4817 MDRVFSVDEISDHLWSPPIPVVGADESSKMSRSASEWAFQRFLQEASASAASPPSSCSVADDVVFVKTQDQAIPSIDAAPLHTNGAVLLNGPPPVPVDSEDYREILKSKLNLACAAVAMTRGSLAKSQDPATLPDSGSQPSNPSQIGSQPTFKGSSPSGNDSSKLQDKETKVPAGIPSIPTMQKKPAVVVRPSTSGSSRELSDDDEAEGETEMNDNMDPADVKRVRRMLSNRESARRSRRRKQAHLTELETQASELRGENSSLLKRLTDVSQKYGDSAVDNRVLKADVETLRAKVKMAEETVKRITGLNPMFNAMSEISSMGMPSFDGSPSDTSADAAIPTVQDDPHHHFYQPTSNNPMPSHDLRVNNGLGDISSIENVQQNTAAVVGGNKMGQAASSLQRVASLEHLQKRIRGGVDSCGPSNREQ* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01759 426 PANTHER BASIC LEUCINE ZIPPER 63 1 417 - -
Rops6g01759 426 Gene3D - 222 275 - -
Rops6g01759 426 CDD bZIP_plant_GBF1 224 274 IPR045314 GO:0003700|GO:0006355
Rops6g01759 426 Pfam Basic leucine-zipper C terminal 290 416 IPR020983 -
Rops6g01759 426 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 221 273 IPR004827 GO:0003700|GO:0006355
Rops6g01759 426 FunFam BZIP transcription factor 221 272 - -
Rops6g01759 426 SUPERFAMILY Leucine zipper domain 223 273 IPR046347 GO:0003700|GO:0006355
Rops6g01759 426 SMART brlzneu 219 283 IPR004827 GO:0003700|GO:0006355
Rops6g01759 426 MobiDBLite consensus disorder prediction 126 163 - -
Rops6g01759 426 Coils Coil 281 301 - -
Rops6g01759 426 MobiDBLite consensus disorder prediction 126 223 - -
Rops6g01759 426 Coils Coil 232 266 - -
Rops6g01759 426 Pfam bZIP transcription factor 222 272 IPR004827 GO:0003700|GO:0006355
Rops6g01759 426 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 226 241 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01759 Rops-Chr6 35241887 35245642 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g01759 1 312 bZIP Transcription Factor Family AT4G02640 41.935 1.44e-56 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Rops6g01759 bZIP_C 4.5e-45 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01759 K25784 - gmx:778135 598.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g01759 6 35241887 35245642 Rops6g01759 6 35241887 35245642 ECH
Rops8g04106 8 82981705 82986910 Rops6g01759 6 35241887 35245642 PCT