Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01748 ATGCGTATCAATGTGTGTCTGCTTCTTGTTTTGTTGAATGCCCTTCCTGCATGGAGCGGCAACAACGTTGATTCATTGATGTTGGGGTGTGGTTTGGGTGATGGTGGTGGCAAAGACGGTGATGGAAGACAATGGATCCCTGATAACAAGTACCTCTCAGGTGGTGATTCCATCACAACCAAAGCCTCTTACCAAGATCCTTCTCTTTTGTCAGAGATTCCATACATGACAGCTAGAATCTTCACATCAGAATCAACATACAAATTCGCTGTTCAACCTGATAAGCGTTACTGGCTCAGGCTCCATTTCTACCCCTCCATTTATGGCAGTTTCAACCCTTCAGATTCATATTTCTCCGTTTCAGCAAATGGGGTTACACTCCTTTCCAATTTCAGCGCCTCCATCACATGTCAGGCACTCTCACAAGCTTACCTTGATAGAGAGTATTCCCTTGCGCCTTTGAATTCCGACACTCTCACTGTTACCTTCAAGCCTTCTGACAAGTCTTTCGCTTTTGTCAATGGTATTCAGCTGATCCAAATGCCTGAGTTGTTTGATTCAGCTTCGTTGGTGGGTTATTCTGACCAAACCGTGGATGCAAAAAGTTTGTACTTTCAGACAATGTTCAGATTAAACGTTGGTGGGCAATATATATCTCCGAACCAAGATTCTGGTCTAAGCAGAATGTGGTACGATGATACACCTTACTTGTATGGTGCAGCCACTGGTGTCACAAACCAAGCTGAAAAGAACGTCAAAATTGACTACCAGACCATGTCACAGTACATTGCACCTCCCAACGTGTACTCCACGTCACGATCGATGGGAAATAATAAGGATGTCAACATGGGCTACAATCTCACATGGATTTTCCAAGTTGATCCAAATTCCATGTACCTTGCAAGGTTGCATTTTTGTGATTACTACTATTCCAAAGTCAATGAGATTGTTTTCAATATCTTTCTCAACAACCAAACGGCACAGGCAGAAGCTGATGTGATTGGATGGTCAGGTGGTAAAGGAGTGCCAACTTATAAGGACTATGTGATCTATGTTCAAGGTGAGCCAGGTGATGATCAACTTTGGCTTGCATTGCACCCAGCACCTGATACAAAGCCAGAATATTATGATGCCTTGCTCAATGGGGTTGAGATATTCAAGCTCAACGACACTGACCTTTCTGGCCCCAATCCTCAGCCTTCGGACATGCTGATTGAACATGAAGAGAAGGAAAGAAATTTCCAAGACAACAAACATCACAATAGGACTTTTGTTATTGGCGGAGCTGCTGGAGGCGCTGCAGGTTTTGCATTAGTGGCTGCAATATGTGTTGCTGTCCACCAAAAGAAGAAGAGATCTCCAGGATCATACTCCAACACATCTAGCTGGTTGCCTATCTATGGAAACTCGCACACAACCGGCACCAAATCAGGAGGAGGGTCAGGGAAGAGTGTTGGTAGTGGCAACATATCTGCCATGGCTCAAGGACTGTGCCGCTATTTCTCATTACAAGAGATGAAGCAGGCAACCAAGAATTTTGATGAGTCCAATGTCATTGGTGTAGGAGGCTTTGGAAAGGTTTACAAGGGTGTTATTGATAGTGGGTTCAAAGTGGCAATCAAAAGATCGAATCCACAGTCAGAACAAGGAGTCAATGAATTCCAGACTGAAATTGAGATGCTTTCTAAGCTGAGACACAAGCATTTGGTGTCCTTGATCGGTTTTTGTGAGGAAGATGATGAGATGTGCTTGGTTTATGACTACATGGATCGTGGCACCTTAAGGGAACATCTTTACAAGGGCAACAAACAATTTGATACTCTATCATGGAAGCAAAGGTTGGAGATTTGCATTGGAGCTGCAAGAGGCCTTCATTACCTTCACACTGGGGCCAAGTATACCATCATTCATAGAGATGTCAAAACAACTAACATTCTCCTTGATGAAAATTGGGTTGCAAAAGTGTCAGATTTTGGATTGTCAAAAACAGGTCCAAACATGGACAATGGTCATGTTAGTACTGTGGTGAAGGGTAGCTTTGGATACTTGGATCCTGAATATTTCAGGAGGCAACAGTTGACTGAAAAGTCTGATGTCTACTCATTTGGTGTTGTCCTGTTTGAGGCCCTTTGTGCAAGGCCTGCTCTTAATCCAAGCCTTCCAAAGGATCAGGTAAGCCTTGCGGAATGGGCTTTGCTCTGCAAAAGAAAGGGAACATTGGAGGATATTATTGACCCCAATATCAAAGGAAAGATCAACCCAGAAAGCTTGAAGAAGTTTGCAGATGCAGCTGAGAAGTGTTTGTCTGATCATGGACTTGATCGCCCTTCCATGAATGATCTATTGTGGAATCTAGAATTTGCTCTCAACCTGCAAGAAAACCCTGATAGTTCAGCTCACTCTCCACATAATGAAGAAAGCGAGTTTGAAGAGATAAGCTTGGCAAACAATAACAATGACATGGCAGCACATTATAAAAACCTGAACCTCGGAAGTGAGCATGATCTTGGCCAGGACTCAAATGAAAATTCAGCTGCCATCTTCTCACAACTTGTCAATCCCAAAGGGCGATGA 2574 0.4347 MRINVCLLLVLLNALPAWSGNNVDSLMLGCGLGDGGGKDGDGRQWIPDNKYLSGGDSITTKASYQDPSLLSEIPYMTARIFTSESTYKFAVQPDKRYWLRLHFYPSIYGSFNPSDSYFSVSANGVTLLSNFSASITCQALSQAYLDREYSLAPLNSDTLTVTFKPSDKSFAFVNGIQLIQMPELFDSASLVGYSDQTVDAKSLYFQTMFRLNVGGQYISPNQDSGLSRMWYDDTPYLYGAATGVTNQAEKNVKIDYQTMSQYIAPPNVYSTSRSMGNNKDVNMGYNLTWIFQVDPNSMYLARLHFCDYYYSKVNEIVFNIFLNNQTAQAEADVIGWSGGKGVPTYKDYVIYVQGEPGDDQLWLALHPAPDTKPEYYDALLNGVEIFKLNDTDLSGPNPQPSDMLIEHEEKERNFQDNKHHNRTFVIGGAAGGAAGFALVAAICVAVHQKKKRSPGSYSNTSSWLPIYGNSHTTGTKSGGGSGKSVGSGNISAMAQGLCRYFSLQEMKQATKNFDESNVIGVGGFGKVYKGVIDSGFKVAIKRSNPQSEQGVNEFQTEIEMLSKLRHKHLVSLIGFCEEDDEMCLVYDYMDRGTLREHLYKGNKQFDTLSWKQRLEICIGAARGLHYLHTGAKYTIIHRDVKTTNILLDENWVAKVSDFGLSKTGPNMDNGHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEALCARPALNPSLPKDQVSLAEWALLCKRKGTLEDIIDPNIKGKINPESLKKFADAAEKCLSDHGLDRPSMNDLLWNLEFALNLQENPDSSAHSPHNEESEFEEISLANNNNDMAAHYKNLNLGSEHDLGQDSNENSAAIFSQLVNPKGR* 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01748 857 Gene3D - 204 389 - -
Rops6g01748 857 Gene3D - 28 182 - -
Rops6g01748 857 SMART serkin_6 513 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g01748 857 Gene3D Transferase(Phosphotransferase) domain 1 589 810 - -
Rops6g01748 857 CDD STKc_IRAK 519 786 - -
Rops6g01748 857 PANTHER OS07G0166700 PROTEIN 498 792 IPR045272 GO:0004714|GO:0006468
Rops6g01748 857 Pfam Protein tyrosine and serine/threonine kinase 517 781 IPR001245 GO:0004672|GO:0006468
Rops6g01748 857 ProSitePatterns Protein kinases ATP-binding region signature. 519 541 IPR017441 GO:0005524
Rops6g01748 857 ProSiteProfiles Protein kinase domain profile. 513 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g01748 857 Gene3D Phosphorylase Kinase; domain 1 482 588 - -
Rops6g01748 857 FunFam FERONIA receptor-like kinase 203 389 - -
Rops6g01748 857 FunFam receptor-like protein kinase FERONIA 477 588 - -
Rops6g01748 857 SUPERFAMILY Protein kinase-like (PK-like) 490 788 IPR011009 -
Rops6g01748 857 ProSitePatterns Serine/Threonine protein kinases active-site signature. 635 647 IPR008271 GO:0004672|GO:0006468
Rops6g01748 857 Pfam Malectin-like domain 29 387 IPR024788 -
Rops6g01748 857 FunFam FERONIA receptor-like kinase 25 182 - -
Rops6g01748 857 FunFam Receptor-like protein kinase FERONIA 589 804 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01748 Rops-Chr6 35140294 35143478 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g01748 23 857 Receptor kinase-like Gene Family AT3G51550 53.371 0.0 854
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Rops6g01748 Malectin_like 1.3e-39 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01748 - - gmx:100791236 1386.7