Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01738 ATGCAAACCCACCTGCTGATCTTCTATTGTTTCATTGGTCTCTCTCTTGTTTTTGCCGAGGGAGCTCAAGGTGCAGCAGATGGTGAATTGTCAACTCTGCTCTCAATCAAATCCAGTCTCATTGATCCCATGAATTATCTGAAGGATTGGCAACTACCAAGCAATGTGACACAGCAAGGTTGGTCTCATTGTAACTGGACTGGAGTTGGTTGCAACTCTGAAGGCTTCGTAGAGAGTCTTGACCTCTACAACACGAACCTTAGTGGTCGTGTTTCAGGCCACATCCAATCCCTTTCGAGATTATCTTCTTTCAACATAAGCTGTAACAACTTTGCTTCAAAACTGCCCAAATCACTGTCCAACCTGACATCTCTGAAGAGCTTTGATGTGAGCCAGAACTACTTCACTGGCAGCTTTCCAACTGGTCTTGGAAGAGCTGCAGGATTGAGATCAATTAACGCATCAAGCAATGATTTTTTGGGTTTTCTTCCTGAGGATATTGGAAATGCAACATTGCTTGAGAGCCTTGATTTTCGAGGGAACTACTTTGTAAGTTCAATTCCCAGGAGTTTTACAAATTTGCAGAAGCTCAAATTTCTAGGCCTTTCAGGCAATAACTTCACTGGGGGGATTCCAGGATATCTTGGGGAGCTCACTTCTCTGGAGACAATAATTCTAGGATACAATGAGTTTGTAGGTGAGATCCCTGCAGAGTTTGGCAACCTGACCAATCTTCAATACCTCGACTTGGCTGTAGGCAATCTCAGTGGACAAATTCCACCTGAATTGGGTAAGCTGAAAAAACTCACTACAATTTACTTATACCATAACAACTTCACAGGAAAAATTCCACCTCAACTTGGCAACATTATGTCACTAGCATTTTTGGACCTCTCTGACAATCAGATCTCAGGATATATTCCGGAAGAACTTACCAAATTGGAAAAGTTGCAGCTCTTGAATCTGATGAGCAACAAACTAACTGGTCCTGTACCAGAGAAGCTTGGTGAACTGAAAAATTTACAAGTGCTTGAGCTGTGGAAAAATTCTTTAAAAGGTCCTTTGCCACCAAACCTTGGACAAAATTCTCCTTTGCAGTGGTTGGATGTGTCCTCGAACTCATTGTCTGGTGAGATCCCTCCAGGTTTGTGTACTACAGTCAATCTAACTAAACTAATTCTCTTCAACAATTCCTTCACCGGTTCCATTCCAAGTGGACTTTCAAACTGTTCGTCTTTGGTCCGTGTTCGGATTCAGAACAATCTTATTTCTGGAGCTATTCCAGTTGGTTTTGGAAACCTCCCGGGCCTTCAATGGCTGGAGTTGGCAAAGAACAACCTCACTGGGAAAATTCCTATGGACATTACCTCATCCGCATCACTTTCTTTCATTGATGTATCTTGGAACCACCTTAAGTCATCTCTACCTTCAGAAATTCTTTCTATTCCAACCCTTCAAACCTTCATTGCCTCTCACAACAACTTTGGAGGAAATATCCCAGATGAGTTCCAGGACTGTCCATCTCTATCTGTGCTGGACCTGTCAAACACAAATATCTCTGGCACAATCCCAGAAAGTATTGCTTCTTGTCAAAAGTTAGTCAACCTTAACCTTAGAGACAACCATTTGACAGGTGGAATCCCAAAATCAATCACAAACATGCCCACATTATCTGTTCTTGATTTGTCCAACAATTCACTGACTGGTAGGATACCTGAAAACTTTGGCAGCTCCCCAGCTCTTGAAATGCTGAACCTGTCCTATAACAAACTTGAGGGCCCAGTACCCTCAAATGGGATTCTGGTGACCATAAATCCTAATGATCTTATCGGCAATGCGGGTCTTTGCGGAGGCATTCTTCCTCCATGTTCTCATAGTTTGACTGTGACAAGCCAGCGCAGGAGCTCACACGTCAGACACATCATTATTGGTTTTGTGACTGGCATTTCAGTGATTTTATCTCTTGGTGCAGCATATTTTGGTGGCAGATGGTTGTACAAGAGATGGTACTTGTGTAACAATTTCATCCATGATTGGTTCAAACAGAGCAATGAAGATTGGCCCTGGAGGGTAGTAGCATTCCAAAGGATCAGTTTCACCAGTTGTGAGATCCTAACGTGCATAAAGGACTCAAATGTCATAGGCATGGGAGGCACTGGTATTGTTTACAAAGCTGAAATCCATACACCACATGTAACCGTAGCAGTGAAGAAACTATGGAGGTCAAGAACAGACATAGAAAACGGGAATGATATATTAAGAGAAGCGGAACTCCTAGGAAGACTTAGGCATAGGAATATTGTAAGGCTATTGGGGTATGTGCACAATGAAAGGGATGTGATGATGATTTATGAGTACATGCCTAACGGGAATCTTGGAACAGCACTGCATGGTGAACAATCTGCGAGGTTGCTTGTAGATTGGGTTTCAAGGTACAACGTAGCTCTTGGAGTTGCACAAGGACTGAACTACCTCCACCATGATTGTCACCCACCAGTTATTCACAGGGATATCAAGTCTAACAACATACTCCTTGACGCAAATTTGGAGGCAAGGATAGCAGATTTTGGGTTGGCGAGGATGATGATTCAAAAGAATGAGACAGTTACCATGGTGGCTGGATCCTATGGATATATCGCACCAGAATACGGATACACCCTGAAGGTTGACGAGAAGATTGACATATACAGTTACGGGGTGGTCCTTTTGGAGCTCTTAACTGGCAAAAGGCCTTTAGACCCTGCCTTTGAAGAATCTGTGGATATAGTCGAATGGATAAGAAAGAAGAGAAAAAACAAAGCCTTGTTAGAAGCACTAGATCCCACCATTGCCGGTCAGTGCAAACATGTCCAAGAAGAGATGCTTCTTGTGCTCCGGATTGCACTTCTATGTACTGCCAAGCTTCCCAAGGAAAGACCATCCATGAGAGACATCATCACAATGCTTGGAGAGGCAAAGCCAAGAAGGAAAAGTGTTTGCCATAATGGGGTACAAGACAGTAGTAACGTGGAAAAGCCACCAATCTATACCACCTCCCCAGTAGTAAGTCTTTTGTAG 3057 0.4311 MQTHLLIFYCFIGLSLVFAEGAQGAADGELSTLLSIKSSLIDPMNYLKDWQLPSNVTQQGWSHCNWTGVGCNSEGFVESLDLYNTNLSGRVSGHIQSLSRLSSFNISCNNFASKLPKSLSNLTSLKSFDVSQNYFTGSFPTGLGRAAGLRSINASSNDFLGFLPEDIGNATLLESLDFRGNYFVSSIPRSFTNLQKLKFLGLSGNNFTGGIPGYLGELTSLETIILGYNEFVGEIPAEFGNLTNLQYLDLAVGNLSGQIPPELGKLKKLTTIYLYHNNFTGKIPPQLGNIMSLAFLDLSDNQISGYIPEELTKLEKLQLLNLMSNKLTGPVPEKLGELKNLQVLELWKNSLKGPLPPNLGQNSPLQWLDVSSNSLSGEIPPGLCTTVNLTKLILFNNSFTGSIPSGLSNCSSLVRVRIQNNLISGAIPVGFGNLPGLQWLELAKNNLTGKIPMDITSSASLSFIDVSWNHLKSSLPSEILSIPTLQTFIASHNNFGGNIPDEFQDCPSLSVLDLSNTNISGTIPESIASCQKLVNLNLRDNHLTGGIPKSITNMPTLSVLDLSNNSLTGRIPENFGSSPALEMLNLSYNKLEGPVPSNGILVTINPNDLIGNAGLCGGILPPCSHSLTVTSQRRSSHVRHIIIGFVTGISVILSLGAAYFGGRWLYKRWYLCNNFIHDWFKQSNEDWPWRVVAFQRISFTSCEILTCIKDSNVIGMGGTGIVYKAEIHTPHVTVAVKKLWRSRTDIENGNDILREAELLGRLRHRNIVRLLGYVHNERDVMMIYEYMPNGNLGTALHGEQSARLLVDWVSRYNVALGVAQGLNYLHHDCHPPVIHRDIKSNNILLDANLEARIADFGLARMMIQKNETVTMVAGSYGYIAPEYGYTLKVDEKIDIYSYGVVLLELLTGKRPLDPAFEESVDIVEWIRKKRKNKALLEALDPTIAGQCKHVQEEMLLVLRIALLCTAKLPKERPSMRDIITMLGEAKPRRKSVCHNGVQDSSNVEKPPIYTTSPVVSLL* 1019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01738 1018 SUPERFAMILY Protein kinase-like (PK-like) 702 982 IPR011009 -
Rops6g01738 1018 Pfam Leucine rich repeat N-terminal domain 27 72 IPR013210 -
Rops6g01738 1018 FunFam Leucine-rich repeat receptor protein kinase EMS1 283 363 - -
Rops6g01738 1018 ProSitePatterns Protein kinases ATP-binding region signature. 714 738 IPR017441 GO:0005524
Rops6g01738 1018 Coils Coil 1017 1018 - -
Rops6g01738 1018 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 182 282 - -
Rops6g01738 1018 FunFam MDIS1-interacting receptor like kinase 1 708 790 - -
Rops6g01738 1018 Gene3D Ribonuclease Inhibitor 148 237 IPR032675 -
Rops6g01738 1018 Pfam Leucine rich repeat 412 471 IPR001611 GO:0005515
Rops6g01738 1018 Pfam Leucine rich repeat 532 591 IPR001611 GO:0005515
Rops6g01738 1018 Gene3D Phosphorylase Kinase; domain 1 708 790 - -
Rops6g01738 1018 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 173 977 - -
Rops6g01738 1018 Gene3D Ribonuclease Inhibitor 334 629 IPR032675 -
Rops6g01738 1018 Gene3D Ribonuclease Inhibitor 28 147 IPR032675 -
Rops6g01738 1018 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 365 627 - -
Rops6g01738 1018 SUPERFAMILY RNI-like 254 598 - -
Rops6g01738 1018 SMART serkin_6 708 982 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g01738 1018 ProSiteProfiles Protein kinase domain profile. 708 997 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g01738 1018 Gene3D Ribonuclease Inhibitor 238 333 IPR032675 -
Rops6g01738 1018 Gene3D Transferase(Phosphotransferase) domain 1 791 1005 - -
Rops6g01738 1018 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 26 181 - -
Rops6g01738 1018 PRINTS Leucine-rich repeat signature 293 306 - -
Rops6g01738 1018 PRINTS Leucine-rich repeat signature 554 567 - -
Rops6g01738 1018 SUPERFAMILY L domain-like 50 352 - -
Rops6g01738 1018 FunFam MDIS1-interacting receptor like kinase 1 791 1001 - -
Rops6g01738 1018 Pfam Protein kinase domain 710 979 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g01738 1018 ProSitePatterns Serine/Threonine protein kinases active-site signature. 833 845 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01738 Rops-Chr6 34985004 34988301 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g01738 4 1018 Receptor kinase-like Gene Family AT1G08590 63.698 0.0 1287
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Rops6g01738 Pkinase 1.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01738 - - gmx:100793873 1776.91