Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01704 ATGGAAGGCAACGAGAACCAAGTGAGCTCATTGTTCGAGCAGAGAAGAAACAGTGTGACGGAGCCGGCGACGGCGACGGCAAGCGAGGTGTTGGGAAGCGGTGATGGGTCCCACACGGAGAAGAAGAAGCGGGGGAGGCCCAGAAAGTACGAGTCCCCAGAGGAAGCTTTCGCTGCCGGGAAGGCTTCCTCTACGCTGCCAGGACGAGTCTTCACTCCACACGTCGTTAATGTTGATGCTGGTGAGGATGTTGCCCAAAAAATTATGTTGTTCATACAACAAAGTAGGCAGCGTGAGGTGTGCATTCTGTCTGCATCTGGTTTCATCTCTAATGCCACTCTTCGTCATTCCGCAATCTCGGGAGGCAGTGCTACATATGAGGGTTGGTTTGACATTATTTCACTTACTGGTTCCTATGTCAATAATGAACTTGGAGGTCGGAATGGTGGTCTCAGTGTATGCTTATCTAATACTGATGGGCAATACGTAGGTGGAGGCATTGCTGGACCCCTTCAAGCTGCTAGTCCGGTTCAGGTCATTATTGGTTCATTTGAAATTGACCCCATCAAGTTCACAAGGGCTGGAACAAAACGTGATTTTTCTATCAGCAAGTCAGCAGCAGCAGCTGGTGAGCCAGGATCAAGTTCAGGTTTCCGCCCAGCAGTTGAGTCTTCCAGTGGGAATACAAACCGGGGTACTGAGGAACATCAAGCTATTGGGGGAAGCCATTCCATGCTTCAACAATCTGGTGTGCATGTGACACCTCCCCATCCCTCAGACTGGGGGGGAAGTTGTCCAGATTCAAGAAATGCTGGCTTTGATCTGATAGATTTGAATTTTGATAGTTCTGGAAATTCCTAA 861 0.4936 MEGNENQVSSLFEQRRNSVTEPATATASEVLGSGDGSHTEKKKRGRPRKYESPEEAFAAGKASSTLPGRVFTPHVVNVDAGEDVAQKIMLFIQQSRQREVCILSASGFISNATLRHSAISGGSATYEGWFDIISLTGSYVNNELGGRNGGLSVCLSNTDGQYVGGGIAGPLQAASPVQVIIGSFEIDPIKFTRAGTKRDFSISKSAAAAGEPGSSSGFRPAVESSSGNTNRGTEEHQAIGGSHSMLQQSGVHVTPPHPSDWGGSCPDSRNAGFDLIDLNFDSSGNS* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01704 286 Gene3D - 73 204 - -
Rops6g01704 286 MobiDBLite consensus disorder prediction 1 33 - -
Rops6g01704 286 ProSiteProfiles PPC domain profile profile. 68 206 IPR005175 -
Rops6g01704 286 CDD DUF296 72 184 IPR005175 -
Rops6g01704 286 MobiDBLite consensus disorder prediction 218 254 - -
Rops6g01704 286 MobiDBLite consensus disorder prediction 35 55 - -
Rops6g01704 286 MobiDBLite consensus disorder prediction 205 268 - -
Rops6g01704 286 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 20 234 IPR039605 GO:0003680
Rops6g01704 286 MobiDBLite consensus disorder prediction 1 62 - -
Rops6g01704 286 Pfam Plants and Prokaryotes Conserved (PCC) domain 73 185 IPR005175 -
Rops6g01704 286 SUPERFAMILY AF0104/ALDC/Ptd012-like 70 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01704 Rops-Chr6 34583654 34587893 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g01704 41 263 AT-hook Motif Nuclear Localized (AHL) Family AT3G04590 41.392 1.39e-54 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01704 - - gmx:100809675 298.516