LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Rops6g01704	ATGGAAGGCAACGAGAACCAAGTGAGCTCATTGTTCGAGCAGAGAAGAAACAGTGTGACGGAGCCGGCGACGGCGACGGCAAGCGAGGTGTTGGGAAGCGGTGATGGGTCCCACACGGAGAAGAAGAAGCGGGGGAGGCCCAGAAAGTACGAGTCCCCAGAGGAAGCTTTCGCTGCCGGGAAGGCTTCCTCTACGCTGCCAGGACGAGTCTTCACTCCACACGTCGTTAATGTTGATGCTGGTGAGGATGTTGCCCAAAAAATTATGTTGTTCATACAACAAAGTAGGCAGCGTGAGGTGTGCATTCTGTCTGCATCTGGTTTCATCTCTAATGCCACTCTTCGTCATTCCGCAATCTCGGGAGGCAGTGCTACATATGAGGGTTGGTTTGACATTATTTCACTTACTGGTTCCTATGTCAATAATGAACTTGGAGGTCGGAATGGTGGTCTCAGTGTATGCTTATCTAATACTGATGGGCAATACGTAGGTGGAGGCATTGCTGGACCCCTTCAAGCTGCTAGTCCGGTTCAGGTCATTATTGGTTCATTTGAAATTGACCCCATCAAGTTCACAAGGGCTGGAACAAAACGTGATTTTTCTATCAGCAAGTCAGCAGCAGCAGCTGGTGAGCCAGGATCAAGTTCAGGTTTCCGCCCAGCAGTTGAGTCTTCCAGTGGGAATACAAACCGGGGTACTGAGGAACATCAAGCTATTGGGGGAAGCCATTCCATGCTTCAACAATCTGGTGTGCATGTGACACCTCCCCATCCCTCAGACTGGGGGGGAAGTTGTCCAGATTCAAGAAATGCTGGCTTTGATCTGATAGATTTGAATTTTGATAGTTCTGGAAATTCCTAA	861	0.4936	MEGNENQVSSLFEQRRNSVTEPATATASEVLGSGDGSHTEKKKRGRPRKYESPEEAFAAGKASSTLPGRVFTPHVVNVDAGEDVAQKIMLFIQQSRQREVCILSASGFISNATLRHSAISGGSATYEGWFDIISLTGSYVNNELGGRNGGLSVCLSNTDGQYVGGGIAGPLQAASPVQVIIGSFEIDPIKFTRAGTKRDFSISKSAAAAGEPGSSSGFRPAVESSSGNTNRGTEEHQAIGGSHSMLQQSGVHVTPPHPSDWGGSCPDSRNAGFDLIDLNFDSSGNS*	287

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Rops6g01704	286	Gene3D	-	73	204	-	-
	Rops6g01704	286	MobiDBLite	consensus disorder prediction	1	33	-	-
	Rops6g01704	286	ProSiteProfiles	PPC domain profile profile.	68	206	IPR005175	-
	Rops6g01704	286	CDD	DUF296	72	184	IPR005175	-
	Rops6g01704	286	MobiDBLite	consensus disorder prediction	218	254	-	-
	Rops6g01704	286	MobiDBLite	consensus disorder prediction	35	55	-	-
	Rops6g01704	286	MobiDBLite	consensus disorder prediction	205	268	-	-
	Rops6g01704	286	PANTHER	AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9	20	234	IPR039605	GO:0003680
	Rops6g01704	286	MobiDBLite	consensus disorder prediction	1	62	-	-
	Rops6g01704	286	Pfam	Plants and Prokaryotes Conserved (PCC) domain	73	185	IPR005175	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Rops6g01704	Rops-Chr6	34583654	34587893	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Rops6g01704	41	263	AT-hook Motif Nuclear Localized (AHL) Family	AT3G04590	41.392	1.39e-54	180

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Rops6g01704	-		-	gmx:100809675	298.516

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