Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01698 ATGGCTTTTATCTCTTGCTCTGCCACCGACCTTGCCCCACTCATCAACGCCACCACCAACGCAACCGCCGCTGCCAACTATCTCTGCACCCAATTCGATGCCATTTCTAGAAAGCTCAGCGACACCACCTACGCGGTGGACAACACCTATCTTCTCTTCTCAGCCTATCTGGTCTTCGCCATGCAACTTGGTTTCGCAATGCTCTGCGCTGGTTCCGTTCGAGCCAAGAACACCATGAACATCATGCTCACCAACGTCCTCGACGCTGCCGCCGGTGGCCTCTCCTACTACCTCTTCGGCTTCGCATTCGCCTTTGGATCCCCCTCCAACGGCTTCATCGGCCGCCACTTTTTCGGCCTCAGAGATTACCCTTCCCCATCCGGTGACTACAGCTTCTTCCTCTACCAATGGGCCTTCGCCATCGCCGCCGCCGGAATCACCAGTGGCTCCATCGCCGAGAGAACTCAGTTCGTTGCATATCTCATCTACTCCTCTTTCTTAACAGGCTTTGTCTACCCCATAGTTTCTCACTGGTTCTGGTCCTCCGACGGATGGGCCAGCCCGACCCGAACAGACGGAAATCTCTTATTCGGGTCCGGAGTTATCGACTTTGCCGGCTCCGGAGTTGTTCACATGGTTGGCGGCATAGCAGGGTTATGGGGTGCCTTCATTGAAGGCCCTAGAATTGGCCGGTTCGACCGGACCGGCAGGTCCGTTGCCTTACGCGGCCACAGCTCGTCGTTGGTGGTCCTCGGTTCGTTTTTATTATGGTTCGGTTGGTATGGGTTCAATCCCGGTTCGTTTTTGACCATAGTGAAAAGTTACGGGAACAGCAGAGGCGGTGACGGTAACTTTTATTACGGTCAATGGAGTGCCATAGGGAGGACAGCTGTCACCACAACATTGGCTGGGAGCACTGCGGCTCTGACAACGTTGTTTGGCAAACGGTTATTGGTGGGACACTGGAACGTGATTGACGTGTGTAACGGTTTGCTTGGCGGTTTTGCAGCCATAACGTCCGGTTGTTCCGTTGTAGAACCTTGGGCTGCGATCGTGTGTGGGTTCGTGGCGGCGTGGGTTTTGATTGGGCTCAACAAGGTGGCGGCGAAGTTTGAGTACGATGACCCGTTGGAGGCTGCGCAGTTACACGGCGGGTGCGGCTCGTGGGGGGTGTTGTTCACGGGATTGTTCGCGAAGGGGGAGTATGTGGAGGAGATTTACGGCGTTGGGAGACCGTATGGGTTGTTGATGGGTGGCGGAGGGAGGCTGTTGGCGTCGCAGGTGATTCAGATATTGGTGGTGAGTGTGTGGGTGACGGCGACAATGGCACCGCTGTTCTATGGGCTTCATAAGATGAATTTGTTGAGGATATCAAAGGATGATGAGACTGCAGGGATGGATTTGACGAGGCATGGTGGGTTTGCTTATGCCTACTACGATGAAGATGATGATGGGTCTGTTAAGAAAGCAGGGTTTATGATGGGTAGGATAGAACCTTCTAGTACATCTCCCTCCCCCACGACCACACCCCATCACGCTTCGCCATTGCCAACGACTGCACAACCAGTGTGA 1572 0.5458 MAFISCSATDLAPLINATTNATAAANYLCTQFDAISRKLSDTTYAVDNTYLLFSAYLVFAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLSYYLFGFAFAFGSPSNGFIGRHFFGLRDYPSPSGDYSFFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPIVSHWFWSSDGWASPTRTDGNLLFGSGVIDFAGSGVVHMVGGIAGLWGAFIEGPRIGRFDRTGRSVALRGHSSSLVVLGSFLLWFGWYGFNPGSFLTIVKSYGNSRGGDGNFYYGQWSAIGRTAVTTTLAGSTAALTTLFGKRLLVGHWNVIDVCNGLLGGFAAITSGCSVVEPWAAIVCGFVAAWVLIGLNKVAAKFEYDDPLEAAQLHGGCGSWGVLFTGLFAKGEYVEEIYGVGRPYGLLMGGGGRLLASQVIQILVVSVWVTATMAPLFYGLHKMNLLRISKDDETAGMDLTRHGGFAYAYYDEDDDGSVKKAGFMMGRIEPSSTSPSPTTTPHHASPLPTTAQPV* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01698 523 ProSitePatterns Ammonium transporters signature. 203 228 IPR018047 GO:0008519|GO:0016020|GO:0072488
Rops6g01698 523 MobiDBLite consensus disorder prediction 498 523 - -
Rops6g01698 523 PANTHER AMMONIUM TRANSPORTER 16 480 - -
Rops6g01698 523 Pfam Ammonium Transporter Family 50 476 IPR024041 GO:0008519|GO:0016020|GO:0072488
Rops6g01698 523 NCBIfam ammonium transporter 47 476 IPR001905 GO:0008519|GO:0016020|GO:0072488
Rops6g01698 523 Gene3D Ammonium transporter AmtB like domains 24 493 IPR029020 -
Rops6g01698 523 MobiDBLite consensus disorder prediction 497 523 - -
Rops6g01698 523 FunFam Ammonium transporter 28 491 - -
Rops6g01698 523 SUPERFAMILY Ammonium transporter 44 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01698 Rops-Chr6 34533696 34535267 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g01698 26 509 Inorganic Solute Cotransporters AT1G64780 80.493 0.0 793
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01698 K03320 K07573 gmx:100797209 848.195