Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01694 ATGATGATGCCGATGGAGAGGCATGCAACTGCATTGTTTGTGATGCTGATGTTTACTCTTTCAACAACTATGTTTGTGTGTCCTTCTGAAGGGCTCAATGCAGAGGGTAAATACCTTCTGGACATAAAAGGGAAATTGATTGATAAACACAACCATCTACACAACTGGAACTCAAGTGATTCCACACCTTGTGGTTGGAAGGGTGTCAACTGCAGCACTGGCATCAATCCAATGGTGGTGTCTCTTGACTTGCATGCAATGAATCTCTCAGGGTCTCTGTCTCCCAGCATTGGTGGTTTGCTTCACTTGTATCACCTTAATCTGTCTCAAAATACTTTGTCTGGGATTATACCCAAGGAAATTGGATACTGTTCAAGTTTGCAGGTTCTTGGTCTCAACAATAATCGGTTTGAAGGCCAAATTCCTGTTGAAATAGGTAGGCTTTCAAATTTAACAGAATTGTATCTTTACAACAACCAACTGTCTGGGCCTTTTCCAAAGGAAATTGGCAACCTTTCTTCACTCTCAATACTTATTGCATTCACCAATAATCTCAATGGATCTTTGCCACGTTCTATTGGGAAACTTAAAAGATTGAGACGCTTCCGAGCTGGGCAGAACATGATATCAGGAAGTCTACCCCAAGAGATAAGTGGATGTGAGAGCTTGGAGTATCTTGGTTTAACTCAGAATCAGATAACTGGTGAACTACCAAAGGCACTTGGACTGCTCAAGAACATACAATATTTGGTCCTTAGGGAAAATAATCTTCATGGGGCCATACCTAAAGAGCTTGCAAACTGTACCAATTTGGAGGTTCTTGCTTTGTATCAGAATAATCTTGTGGAAGCAATACCCAAGGAGCTGGGAAAACTTCCACTCCTAAAGAAATTATACCTTTACCGGAATGAGTTGACAGGAGATATTCCAAGGGAGATTGGGAATCTTTCTCTTGCAATAGAGATTGATTTTTCAGAGAACCTGCTGACAGGAGAGATACCAGTTGAGTTGGCTAAAATAAAAGGCTTGCAATTGCTTCATCTCTTCCAGAACAAGCTAACAGGTGTTATCCCAGATGAGCTCACCAGCTTGAAAAACTTGACTGAGCTGGATCTCTCTATTAATTATCTCAAAGGTGCTATTCCTGTTGGATTTCAAGACTTGACCAACTTGACCTCCCTACAACTCTTCAACAACTCATTAAGTGGTAGAATTCCTAAAGCACTGGGAGCAAATAGTCCACTCTGGGTGCTTGATTTATCATACAACTACTTGGTGGGAAGAATTCCAGTCCATCTTTGCCAACATTCTAACTTGATGCTGTTGAACTTAGGATCAAACAAGCTCACTGGAAACATCCCTCATGGAATTACAAGCTGTAAATCCTTGGTGCATCTTCGTCTCTTTGGTAACAGCCTCAGAGGCAGGTTTCCTTCTAATTTGTGCAAACTTGTAAATCTTTCTGCTGTGGAGTTGGATCAGAATGACTTCACTGGCCCTGTTCCTCCACAAATTGGAAACTGCAAAAATTTGCAAAGACTTCACCTTTCTAACAATCACTTTTTATCTGAATTACCAAAAGAAATTGGTAACCTCTCAAAGTTGGTCACCTTTAATGTCTCATCAAATTATCTTTTTGGAAGAGTGCCTATGGAACTGTTCAACTGCAAGAAGCTCCAACGACTTGATCTCAGTCATAACAACTTCATTGGGACTTTTCCAGGTGACATAGGAACTCTTTCACAATTGGAGCTTCTCAGGCTGTCACATAACAATTTTTCCGGGAATATCCCAATGGCAGTGGGAAAACTCTCTCGATTGACTGAGCTACAAATGAGTGACAACTCTTTTTGTGGTTGCATTCCACGTGAGTTGGGTGCCCTCTCATCCTTACAGATTGCATTGAATCTCAGTTATAATAACCTCTCAAGTCAGATACCCTCTGAGCTTGGGAATCTTATCATGCTAGAATCCCTCCAACTCAACAATAACCATTTGAGTGGTAAAATTCCAGACTCTTTTGACAAACTGTCAAGTTTATTAGCCTGCAACTTCTCAAACAATGATCTTACAGGCCCTTTACCTTCCTTACCTCTCTTTCAAAACTCCACATTCAGCTGCTTTTCTGGAAACAAAGGGCTATGTGGAGGACACCTAGGCCCTTGCCCAAATTCAGCTTCACACTCCTCTCCAAATAAACTTGGGAAAGTTCTGGCAATAGCTTCAGCTGTTGTTAGTGGGGTTTCTTTGGTTTTAATTGTACTCCTTATATATCTCATGAGAAGACCAGTGGACTCTATTGTGTCACAGCAAGATATAGATAGTCCATCCCATCATCCACCTCTGCCAGACATGTACTTCTTTCCAAAGGAGGAGTTAACTTTCCAAGACGTGGTTGAAGCTACTGAAAATTTTCATTCCAAATATGTGATTGGAAAAGGAGGTAGTGGAACTGTGTACAAAGCAGATGTATCAACTGGACATACAATTGCTATTAAGAAGCTAACATCAAGCAGTGACAGCATCAGCATAAATGGTTGCTTCCATGCTGAAATCTTAACTTTGGGAAAAGTAAGGCATAGGAATATTGTGAAATTATACGGTTTCTGCTGCAACTACCGTAGCTCAAGTATTCTACTTTACGAGTACATGGCAATGGGTAGTTTGGGGGATTTACTTCATGGAGCATCATCCTCTAGTCTTGATTGGCATGCTCGGTTTAGGATTGCACTTGGAACTGCACAAGGGCTGTCTTATTTGCACCATGATTGCAAGCCTAAGATTATCCACCGTGATATAAAGCCAAATAACATACTTATTGACCATGAATTTGAAGCTCATGTTGGGGATTTTGGCTTGGCAAAACTGACCGATATGTCACGGTCTAAATCAGTGTCTGCTGTTGTAGGCTCTTATGGCTACATTGCCCCTGAGTATGCATACACAATGAAAATCACGGAAAAATGTGATGTCTACAGCTATGGAGTTGTCCTTCTGGAGTTACTGACTGGTAAGAAGCCAATCCAATCGTTGGATCAAGGTGGTGATCTTGTGACATGGGTGAGAAATCATATCCAAAAATATTCATTGTCACTGGACATCCTTGATGCTCGATTAGACCTACTAGATGAAATATATGTCGCTCAAACCTTTGATGTCTTGAAAATTGCTCTACTCTGCACCGACACATCTCCTTCTAGACGCCCAACTATGCGTAAAGTTGTGTCAATGCTTACAAGTTCTAGCAAACGGACAGAGCAGTCCTCCTTCTCTTCATTTCAAGAATCAAGTGACAGAAAATAA 3303 0.4105 MMMPMERHATALFVMLMFTLSTTMFVCPSEGLNAEGKYLLDIKGKLIDKHNHLHNWNSSDSTPCGWKGVNCSTGINPMVVSLDLHAMNLSGSLSPSIGGLLHLYHLNLSQNTLSGIIPKEIGYCSSLQVLGLNNNRFEGQIPVEIGRLSNLTELYLYNNQLSGPFPKEIGNLSSLSILIAFTNNLNGSLPRSIGKLKRLRRFRAGQNMISGSLPQEISGCESLEYLGLTQNQITGELPKALGLLKNIQYLVLRENNLHGAIPKELANCTNLEVLALYQNNLVEAIPKELGKLPLLKKLYLYRNELTGDIPREIGNLSLAIEIDFSENLLTGEIPVELAKIKGLQLLHLFQNKLTGVIPDELTSLKNLTELDLSINYLKGAIPVGFQDLTNLTSLQLFNNSLSGRIPKALGANSPLWVLDLSYNYLVGRIPVHLCQHSNLMLLNLGSNKLTGNIPHGITSCKSLVHLRLFGNSLRGRFPSNLCKLVNLSAVELDQNDFTGPVPPQIGNCKNLQRLHLSNNHFLSELPKEIGNLSKLVTFNVSSNYLFGRVPMELFNCKKLQRLDLSHNNFIGTFPGDIGTLSQLELLRLSHNNFSGNIPMAVGKLSRLTELQMSDNSFCGCIPRELGALSSLQIALNLSYNNLSSQIPSELGNLIMLESLQLNNNHLSGKIPDSFDKLSSLLACNFSNNDLTGPLPSLPLFQNSTFSCFSGNKGLCGGHLGPCPNSASHSSPNKLGKVLAIASAVVSGVSLVLIVLLIYLMRRPVDSIVSQQDIDSPSHHPPLPDMYFFPKEELTFQDVVEATENFHSKYVIGKGGSGTVYKADVSTGHTIAIKKLTSSSDSISINGCFHAEILTLGKVRHRNIVKLYGFCCNYRSSSILLYEYMAMGSLGDLLHGASSSSLDWHARFRIALGTAQGLSYLHHDCKPKIIHRDIKPNNILIDHEFEAHVGDFGLAKLTDMSRSKSVSAVVGSYGYIAPEYAYTMKITEKCDVYSYGVVLLELLTGKKPIQSLDQGGDLVTWVRNHIQKYSLSLDILDARLDLLDEIYVAQTFDVLKIALLCTDTSPSRRPTMRKVVSMLTSSSKRTEQSSFSSFQESSDRK* 1101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01694 1100 ProSitePatterns Protein kinases ATP-binding region signature. 811 834 IPR017441 GO:0005524
Rops6g01694 1100 Gene3D Ribonuclease Inhibitor 286 385 IPR032675 -
Rops6g01694 1100 Gene3D Ribonuclease Inhibitor 184 285 IPR032675 -
Rops6g01694 1100 Gene3D Ribonuclease Inhibitor 386 730 IPR032675 -
Rops6g01694 1100 Gene3D Phosphorylase Kinase; domain 1 777 883 - -
Rops6g01694 1100 ProSitePatterns Serine/Threonine protein kinases active-site signature. 928 940 IPR008271 GO:0004672|GO:0006468
Rops6g01694 1100 Pfam Leucine Rich Repeat 656 677 IPR001611 GO:0005515
Rops6g01694 1100 SUPERFAMILY L domain-like 48 402 - -
Rops6g01694 1100 FunFam Probable leucine-rich repeat receptor-like protein kinase At2g33170 190 283 - -
Rops6g01694 1100 Pfam Leucine rich repeat N-terminal domain 33 72 IPR013210 -
Rops6g01694 1100 Pfam Protein kinase domain 806 1076 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g01694 1100 SMART LRR_typ_2 388 412 IPR003591 -
Rops6g01694 1100 SMART LRR_typ_2 100 124 IPR003591 -
Rops6g01694 1100 SMART LRR_typ_2 580 604 IPR003591 -
Rops6g01694 1100 SMART LRR_typ_2 653 676 IPR003591 -
Rops6g01694 1100 SMART LRR_typ_2 292 316 IPR003591 -
Rops6g01694 1100 SMART LRR_typ_2 244 268 IPR003591 -
Rops6g01694 1100 SMART LRR_typ_2 508 532 IPR003591 -
Rops6g01694 1100 SMART LRR_typ_2 364 387 IPR003591 -
Rops6g01694 1100 SMART LRR_typ_2 148 172 IPR003591 -
Rops6g01694 1100 SMART LRR_typ_2 628 652 IPR003591 -
Rops6g01694 1100 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 769 883 - -
Rops6g01694 1100 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 342 1079 - -
Rops6g01694 1100 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 412 726 - -
Rops6g01694 1100 FunFam Putative leucine-rich repeat receptor-like protein kinase 291 381 - -
Rops6g01694 1100 ProSiteProfiles Protein kinase domain profile. 805 1090 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g01694 1100 MobiDBLite consensus disorder prediction 1076 1100 - -
Rops6g01694 1100 Gene3D Transferase(Phosphotransferase) domain 1 884 1099 - -
Rops6g01694 1100 SUPERFAMILY Protein kinase-like (PK-like) 779 1078 IPR011009 -
Rops6g01694 1100 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 884 1095 - -
Rops6g01694 1100 SUPERFAMILY L domain-like 386 724 - -
Rops6g01694 1100 Gene3D Ribonuclease Inhibitor 31 183 IPR032675 -
Rops6g01694 1100 SMART serkin_6 805 1078 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g01694 1100 Pfam Leucine rich repeat 342 401 IPR001611 GO:0005515
Rops6g01694 1100 Pfam Leucine rich repeat 534 593 IPR001611 GO:0005515
Rops6g01694 1100 Pfam Leucine rich repeat 246 305 IPR001611 GO:0005515
Rops6g01694 1100 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 31 189 - -
Rops6g01694 1100 MobiDBLite consensus disorder prediction 1076 1094 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01694 Rops-Chr6 34447025 34447885 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g01694 57 1078 Receptor kinase-like Gene Family AT1G73080 39.736 0.0 666
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Rops6g01694 Pkinase 3.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01694 - - psat:127091273 1650.95