Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01678 ATGCCCGATGGACAAGTCATCACAGTTAAGCAGTATAAGAAACTGAAGGCATTTGCAGCATCAGAATTCTGTTTGGAAGTTGAAACACTTGGTCGTGCACAGCACAGGAATCTGCTCAAGTTGGTGGGCTACTGCATTGACACAGAATGGCTTCTAATATATGAATTTGCTTGTAATGGTTCCTTAGAAAAGCACCTGTACGGAACAGAAACAAACCAGCTGATGGCTTGGCATGATAGAATGAAGGTTGCAGTAGGCACTGCAAGAGGCTTGAAATATCTACATGAAGATTGCCGAGAGGGTTGCATTGTACACAGAGACTTGACACGTAGCAACATTCTTCTCACTCATGACTTCGAGCCCATGATTGGAAATTTTGGTCTTGCAAGATGGCAACTCAATTCGCAATCAGCTGAGGAGACAAGTCTAATTGGTACATTTGGTTACTTGGCTCCTGAATACCTACAAACCGGCCAAGTCTCAGAGAAAGCTGATGTCTATGCATTTGGAGTCATTTTATTGGAGCTTTTAAGTGGCTTTAGAGCCATGGAGTTCTCAAGAAAAACAGGCAAACAGTCTCTATCAGAATGGGTGAGTTTCCTGCACTAA 609 0.4302 MPDGQVITVKQYKKLKAFAASEFCLEVETLGRAQHRNLLKLVGYCIDTEWLLIYEFACNGSLEKHLYGTETNQLMAWHDRMKVAVGTARGLKYLHEDCREGCIVHRDLTRSNILLTHDFEPMIGNFGLARWQLNSQSAEETSLIGTFGYLAPEYLQTGQVSEKADVYAFGVILLELLSGFRAMEFSRKTGKQSLSEWVSFLH* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01678 202 Gene3D Phosphorylase Kinase; domain 1 1 57 - -
Rops6g01678 202 Gene3D Transferase(Phosphotransferase) domain 1 58 202 - -
Rops6g01678 202 ProSiteProfiles Protein kinase domain profile. 1 202 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g01678 202 Pfam Protein tyrosine and serine/threonine kinase 7 178 IPR001245 GO:0004672|GO:0006468
Rops6g01678 202 ProSitePatterns Tyrosine protein kinases specific active-site signature. 103 115 IPR008266 GO:0004672|GO:0006468
Rops6g01678 202 PANTHER OS01G0750732 PROTEIN 2 198 - -
Rops6g01678 202 FunFam Os07g0541700 protein 57 146 - -
Rops6g01678 202 SUPERFAMILY Protein kinase-like (PK-like) 2 183 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01678 Rops-Chr6 34129823 34130827 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g01678 3 197 Trihelix Transcription Factor Family AT1G70460 45.918 3.88e-58 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Rops6g01678 PK_Tyr_Ser-Thr 7.6e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01678 - - aprc:113871668 345.51