Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01671 ATGTTTCTAATAACTCTTTTGCTTTTGCTGGCTCCTCATGCCAACGCAGAAAGCTCCACCACATACATAGTTCACATGGACAAGTCCCTCATGCCTCAAGTCTTCACGACCCATCGTGATTGGTATGAATCCACCGTTTCTTCCATAAAGTTGGCAACAACTGATCAGCAATCCAAGCAATCAAAGAAGTTAGTGTACACATACAATCATGCCATGCATGGATTCAGTGCAGTTTTATCATCGGATGAGTTGGAGACACTAAACAAGGCCCATGGTTTTGTCACAGCTTACCCTGACAGGTCTGCCACCATAGACACCACCCACACCTTTGAGTTTCTCTCACTTGATCCTTCTAATGGGCTGTGGAATGCATCAAACCTTGGGGAGGGTGTCATTGTCGGTGTCATTGACACTGGTGTCTGGCCTGAGAGTGACAGCTTCAAAGATGATGGCATGAGCAAGAAACTCCCATCCAAATGGAAAGGAACATGTGAGGCTGGACAAGATTTCAACACCTCCATGTGCAACTTGAAATTGATTGGAGCTAGATATTTTAACAAGGGTGTGATTGCAGCAATACCAAATGTCACAATCAGCATGAACTCAGCTAGAGACACTCAGGGTCATGGGAGCCACACATCATCCACTGTTGCAGGCAACTATGTTAATGGCGCCTCTTTCTTTGGTTATGCAAAAGGGGTGGCTAGAGGCATTGCACCAAGAGCTAGAATTGCCATGTACAAAGTCCTTTGGGATGAGGGACGTCTAGCCTCTGATGTTCTTGCTGGAATGGACCAAGCAATTGATGATGGGGTTGATGTGATATCCATCTCTATGGGTTTTGATAATGTTCCACTTTATGAGGACCCAGTAGCAATAGCTGCATTTGCAGCAATGGAGAAGGGAGTGTTGGTTTCATCTTCCGCTGGGAATTTTGGTCCTGCTCTTGGTACCTTGCACAATGGAATCCCGTGGGTTCTGACAGTGGCAGCAGGTACCATAGACCGTACATTTGGGAGTTTGAAACTAGGAAATGGCCAAACCATTGTGGGTTGGACATTGTTTGCAGCAAATGCCATAGTGGAAAATTTTCCACTTGTCTACAACAAGACTCTATCTGCATGCAACTCAGTGAAGTTGTTATCCGAAGTACCCACAAATGGGATCATTATTTGTGATGCCTTAGAGTCTGTCCCTGTCCTTACTCAAATCAGAACTATAACTGAGGCCAGTGTGGTAGGTGGTGCTGTGTTTATCTCTGAAGATCCAATACTAATTGAAACAGGGCATGTGTTCTCTCCAAGTATTGTAATCGGTCTAAGGGATGGAACATCCCTGATCAAATATGCAAGGAGTGTTGAAAATCCCACTGCCAGCATCAAATTTCAACAAACATTTGTTGGAATAAAGCCTGCACCAGCTGCTGCTTATTACACTTCAAGAGGTCCTTCACCCAGTTACCCGGGGGTCTTAAAGCCTGATGTAATGGCACCTGGTTCTAATGTTCTTGCTGCTTTTGTTCCAAATAAACCATCAGCTAAAATTGGAACAAACGTGTTTTTATCCAGTGACTACAATTTTTTGTCTGGGACATATATGTCATGCCCTCATTCATCTGGTGTTGCTGCACTCCTAAAAGCTGCACACCCTGATTGGAGTGCAGCTGCTATAAGGTCTGCATTAGTCACCACTGCAAATCCCCTTGATAATACCCAAAATCCAATTGGTGACAATGGCAACCCATCTCAACATGCTTCACCTTTGGCTATGGGAGCTGGTGAGATTGATCCTAATAGAGCACTGGATCCAGGTTTGGTATATGATGCTACCCCACAGGATTATGTTGACCTCCTTTGTGCTTTGGGCTACACACACAACCAAATCCTGACTATCACAAGATCAAACTCTTATAACTGTACAAACTCATCATTTGATCTTAACTACCCTTCGTTTATAGTCTTGTATGGTAACAAAACAAAATCAACAGTTGGCAAGTTTCAAAGGACGGTAACCAATGTTGGAGATGGTGCTGCTACGTACAGAGTAAAGGTGACACAACCCAAGGGCTCTGTGGTTAATGTGTCACCTGAGACACTAGCATTCAGCTATAAGCATGAGAAGCAGAGCTACTCTGTTGTTATAAAGTATACGAGGTACAAGAAGCAAAATGTCTCATTTGGGGACCTTGTTTGGGTTGAAGATGGTGGTGCACGCACGGTTAGAAGCCCCATTGTAGTGGCACCAAGTGAAAATTTTGTATAA 2262 0.4408 MFLITLLLLLAPHANAESSTTYIVHMDKSLMPQVFTTHRDWYESTVSSIKLATTDQQSKQSKKLVYTYNHAMHGFSAVLSSDELETLNKAHGFVTAYPDRSATIDTTHTFEFLSLDPSNGLWNASNLGEGVIVGVIDTGVWPESDSFKDDGMSKKLPSKWKGTCEAGQDFNTSMCNLKLIGARYFNKGVIAAIPNVTISMNSARDTQGHGSHTSSTVAGNYVNGASFFGYAKGVARGIAPRARIAMYKVLWDEGRLASDVLAGMDQAIDDGVDVISISMGFDNVPLYEDPVAIAAFAAMEKGVLVSSSAGNFGPALGTLHNGIPWVLTVAAGTIDRTFGSLKLGNGQTIVGWTLFAANAIVENFPLVYNKTLSACNSVKLLSEVPTNGIIICDALESVPVLTQIRTITEASVVGGAVFISEDPILIETGHVFSPSIVIGLRDGTSLIKYARSVENPTASIKFQQTFVGIKPAPAAAYYTSRGPSPSYPGVLKPDVMAPGSNVLAAFVPNKPSAKIGTNVFLSSDYNFLSGTYMSCPHSSGVAALLKAAHPDWSAAAIRSALVTTANPLDNTQNPIGDNGNPSQHASPLAMGAGEIDPNRALDPGLVYDATPQDYVDLLCALGYTHNQILTITRSNSYNCTNSSFDLNYPSFIVLYGNKTKSTVGKFQRTVTNVGDGAATYRVKVTQPKGSVVNVSPETLAFSYKHEKQSYSVVIKYTRYKKQNVSFGDLVWVEDGGARTVRSPIVVAPSENFV* 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01671 753 ProSiteProfiles Serine proteases, subtilase domain profile. 109 601 - -
Rops6g01671 753 CDD Peptidases_S8_3 103 566 IPR034197 -
Rops6g01671 753 PRINTS Subtilisin serine protease family (S8) signature 128 147 IPR015500 -
Rops6g01671 753 PRINTS Subtilisin serine protease family (S8) signature 529 545 IPR015500 -
Rops6g01671 753 PRINTS Subtilisin serine protease family (S8) signature 205 218 IPR015500 -
Rops6g01671 753 MobiDBLite consensus disorder prediction 572 593 - -
Rops6g01671 753 Pfam Peptidase inhibitor I9 21 102 IPR010259 -
Rops6g01671 753 CDD PA_subtilisin_like 340 460 - -
Rops6g01671 753 Gene3D Peptidase S8/S53 domain 130 614 IPR036852 GO:0004252|GO:0006508
Rops6g01671 753 SUPERFAMILY Subtilisin-like 105 605 IPR036852 GO:0004252|GO:0006508
Rops6g01671 753 Pfam Subtilase family 128 573 IPR000209 GO:0006508|GO:0008236
Rops6g01671 753 Gene3D - 335 467 - -
Rops6g01671 753 Gene3D - 618 748 - -
Rops6g01671 753 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 22 746 IPR045051 -
Rops6g01671 753 FunFam Subtilisin-like protease SBT1.9 11 105 - -
Rops6g01671 753 FunFam Subtilisin-like protease SBT1.5 130 341 - -
Rops6g01671 753 Pfam Fibronectin type-III domain 645 746 IPR041469 -
Rops6g01671 753 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 10 104 IPR037045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01671 Rops-Chr6 34022157 34024418 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g01671 1 747 Subtilisin-like Serine Gene Family AT5G67360 42.023 0.0 536
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01671 - - gmx:100806072 1251.5