Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01669 ATGACAATTTCAAAAGATAGGGTTAAGCCATCTCCCATGCCTGATAGCTGGAAATTGAAAGAAATATTTGCTACTGGGATTGTTCTTGGAAGTTACTTAGCATTGATGACTGTCATATTCTTCTGGGCAATGAGCGAAACTACCTTCTTCCCTGACAAATTTGGAGATAGACACCTGACTCACAATGAAAAGATGTCTGCTCTGTATCTACAAGTCAGTATAGTTAGCCAGGCTCTGATTTTTGTAACCCGTTCCCGTAGCTGGTCCTTTGTTGAACGCCCTGGATTGCTATTAGTCGTTGCTTTCATTATTGCTCAGCTGATTGCTACAATCATAGCAGTATATGCCAACTGGGGTTTTGCAAAAGTCAAAGGAATTGGTTGGGGCTGGGCAGTATATGCCTGCATGTGCATGACAGGAGTCAATCCAGCAGAAATTTGCAAGAGAAGAGCTGAAGTTGCAAGGCTTCGTGAGCTTCACACACTTAAGGGACATGTTGAGTCTGTAGTGAAGCTGAAAGCTCTGGACATTGATACAATCCAGCATCATTACACAGTGTGA 561 0.4278 MTISKDRVKPSPMPDSWKLKEIFATGIVLGSYLALMTVIFFWAMSETTFFPDKFGDRHLTHNEKMSALYLQVSIVSQALIFVTRSRSWSFVERPGLLLVVAFIIAQLIATIIAVYANWGFAKVKGIGWGWAVYACMCMTGVNPAEICKRRAEVARLRELHTLKGHVESVVKLKALDIDTIQHHYTV* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01669 186 Gene3D - 1 146 - -
Rops6g01669 186 PANTHER CALCIUM-TRANSPORTING ATPASE 1 134 - -
Rops6g01669 186 Gene3D - 147 186 - -
Rops6g01669 186 SUPERFAMILY Calcium ATPase, transmembrane domain M 3 139 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01669 Rops-Chr6 33989117 33991241 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g01669 144 186 Primary Pumps ATPases AT2G18960 83.721 2.60e-17 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01669 K01535 - gmx:100816905 247.284