Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01654 ATGAAGAAGACCACTCTTAAACGGTGGCCCCTCGCCTCCACGAAATCTCCGGCACCGATCACTCACTCAACCACCTTCCTCCTTCTTTTGGCTTATTCAAAGCACTCAACCGAAAACAATAATACTATTACCCCACTAGATTGGAACACAAAGGGTTTAGGAAGCAACTCAGAGAATAACTACAACAAAAACCAAGACTTGCTATTAAGCACTTCATGCAGCAGTAACCAAAACTATCAACAACAGCCAAAGCTTGAGAACTTTCTCGGTGGCGACCATATCCCAAACGGTTTAGGAAGAGTTGCAGCTCAGCCGTCAGAAAAACCAGCTACCGTCAAATTACCGAACGTGGATGGAGAAAGTTCCTCTTCTGATAGTAAGCAACAATCCACAACTGCCCTTGATAGCCAAACTAGAGGAACTATTGCTGAGACTGTGACCAGAAAGTCTGTTGACACATTTGGACAGAGAACTTCCATATACCGTGGTGAAACCAGACATCATCAACATGGTAGATGGCAAGCTAGGATTGGAAGAGTTGTAGGCAACAAAGATCTCTACTTGGGAACTTTTAGGAACACTCACCATTTCTTTCACTCCAATTCTGGGTTGCACAATGTCATCAACATTGATAACAACAATAGCTCTGGATCTAACTCTCTCATTTATGGTGGTGGGGATGGTAATGGTTACATGATTCCCATGGCTACTATTACTACTACTTTCATTGCAGATGATGGTAACCAAAATCATAGAATCAATGGTTTTGGTGATAATGGTGTTAAAACGTTTGGTTACGAAAATGTTTTCAGTTCTAGTGATCTTTATCATGCAAGGAACGTATGTTATCTTTCGCAGCAATTATCTGAAGATGCATGCAATAATACTTGGGTGCCCACTTCGATTTCAACTCTTGCACCACCAAGGCCTACTAATATGGCTCTTTGCCCTGGAACTTCACCGTTCACGTTGTTGCATGAATAG 984 0.4217 MKKTTLKRWPLASTKSPAPITHSTTFLLLLAYSKHSTENNNTITPLDWNTKGLGSNSENNYNKNQDLLLSTSCSSNQNYQQQPKLENFLGGDHIPNGLGRVAAQPSEKPATVKLPNVDGESSSSDSKQQSTTALDSQTRGTIAETVTRKSVDTFGQRTSIYRGETRHHQHGRWQARIGRVVGNKDLYLGTFRNTHHFFHSNSGLHNVINIDNNNSSGSNSLIYGGGDGNGYMIPMATITTTFIADDGNQNHRINGFGDNGVKTFGYENVFSSSDLYHARNVCYLSQQLSEDACNNTWVPTSISTLAPPRPTNMALCPGTSPFTLLHE* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01654 327 SMART rav1_2 160 214 IPR001471 GO:0003700|GO:0006355
Rops6g01654 327 MobiDBLite consensus disorder prediction 86 147 - -
Rops6g01654 327 MobiDBLite consensus disorder prediction 116 147 - -
Rops6g01654 327 SUPERFAMILY DNA-binding domain 159 193 IPR016177 GO:0003677
Rops6g01654 327 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 144 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01654 Rops-Chr6 33663079 33667179 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g01654 123 191 AP2-EREBP Transcription Factor Family AT4G37750 56.522 5.11e-17 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01654 K09285 - gmx:100797584 129.798