Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Rops6g01648 | ATGGATTTGGTATTCCTGAGAAAGGGTGAAGTACCCTCCTTATCAAAGGAAGACAAATCAGAGACATCGTTACATATTGCCTTTTGCATGAGGTTACTGATGGGGACTGAGCTAATGAGAATATGTGTTAAAGAAGATAATGATGATTTTCCATCAGTCCCACCAGGTTTTGAGTCATATACATCTTTCTCACTGAAGAGGGTAGAAGACAATGACAAACAAAATGATCAAAATATGACCAGCTGTTCAGCCTCTACAAGTGCTCCTGAATCACATTCAACTCTGGTGGAAAATGATGTTCAAGTTCGTGATACTGCTGCAAAGGTTCCTAAATCCCGTCGACGAAGACCATGGATTAACTATGGACAGTATGAGAACAGTTCAGAGGAAGACTCTGATTGTGAGCGACATGATCAAAATATCTCCTCAAGACCTTGTCTTCCTAAGGGAGTCATCCGTGGATGTCCAGATTGCAGTAATTGCCAAAAGGTTGTTGCCAGATGGCGACCAGAAGATGCTCGTAGGCCCAATCTTGAGGATGCTCCTGTTTTCTATCCCACTGAAGAGGAGTTTCAAGATACTTTGAAATATATATCAAGCATTCGCTCCAGAGCTGAACCATATGGAATTTGTCGCATTGTTCCCCCATCTTCTTGGAAACCCCCTTGTCCTCTCAAGGAAAAAAGTACATGGGAGGGTTCTAAATTTGCTACTCGTGTTCAGAGGATTGACAAACTTCAGAATCGTGATTCAGGGAGAAAGATGTCAAGAAATCAAAGTAATATGAAAAGGAAAAGGAGAAGATGCACAAGAATGGGAGTGGCTAATGGCCCTGGAACAGGACCTAATGCGGTATTTTTTGAAGCTGAAAGTTTTGGGTTTGAACCTGGTCCAGAATTTACCTTGGAAACATTTCAGAGATATGCAGATGATTTTAAGGTCAAATACTTCAAGAAAAATGAGAATGTATCTCATTCAAGTGCCAATACAACAAATTTAAATGGTACTTCAGAGCCTTCTGTGGAAAACATTGAGGGTGAATATTGGCGGATGGTTGAGAGTCCTACTGAAGAAATTGAGGTGCTTTATGGAGCTGATCTGGAAACTGGGGTTTTTGGAAGTGGTTTTCCTAGCAATTCTAGTCATGTCGGTTCCACTTCGCATGAACAGTACATAAAATCTGGATGGAATTTAAATAACTTTGCAAGGCTGCCTGGATCACTGCTCTCTTATGAAAGCAGTGATATATCTGGTGTTCTAGTGCCATGGTTGTATCTTGGAATGTGCTTTTCCTCTTTTTGTTGGCATGTGGAAGATCATCATTTATATTCATTGAATTATATGCATTGGGGTGCTCCAAAAATGTGGTATGGTGTCCCTGGAAAGGATGCTTGCAAATTGGAAGAGGCCATGAGAAAGCATTTACCTGAACTTTTTGAAGAACAACCTGACTTGCTTCATAAGCTGGTCACTCAGCTTTCTCCTTCGATCCTTAAGTCTAAAGGAGTACCAGTTTATAGGTGTGTCCAAAACCCCGGGGACTTTGTTCTAACATTTCCTCGAGCCTACCATGCTGGGTTCAATTGCGGCTTCAACTGTGCTGAGGCTGTTAATGTAGCTCCTGTTGACTGGCTGCCCCATGGGCATATTGCTATAGAGCTGTACCGGGAGCAAGGGCGCAAGACTTCTATATCCCATGATAAGCTGTTGCTTGGGGCCGCTAGGGAAGCAGTACGAGCCCAATGGGAGCTTAATTTACTGAAGAAAAACAGTTCGGGTAATCTACAATGGAAAGATGTTTGCGGAAAGGATGGCCTTCTGGCAAAAGCACTCAAGGCACGGGTTGAGATGGAGCGAGCAAGAAGGGAATTTCTCTGCAGTTCTTCACAGGCATTCAAAATGGAGAGTAGTTTTGATGCTACAAGTGAAAGGGAATGCAACGTTTGCTTTTTTGATTTACACCTATCTGCAGCTGGTTGTCGCTGTTCCCCAGATAGATATGCTTGCTTGGATCATGCAAAGCAATTTTGTTCATGCTCTTGGGATTCCAAATTTTTCCTCTTTCGTTATGATATTGGTGAACTAAATATTCTTGTTGAGGCATTGGAAGGAAAATTAAGTGCAGTATACAGATGGGCAAAATTAGATCTTGGGCTGGCACTAACTTCTTATGTCTCAGCAGACAAGGAAACAATACTCAAGGAGTTGAGATTGCAGTCATCCAACTTGTCTCATTCTTCCAGGGCCATTGTGAATAAAGATGTGGCTTTGCATCCATCAAATAAATTCATTGAAGATTCTCAATTGATAGATGTTCCAATAAAGGATCAAGCACATTCAGCGAATAGCAAGGATCAGAGCTATCTTCAACAAAGGAAATCAGCAGAAGCTGTATCTCCTTTGAGTCACATGAAGGAACTGTTAACATTTAACAGCTCAAAACCTACATGTGAGATGGCTAATCGTAAGATCTCTGTTAATAAAGATGAATCTGTTAATTGTAGATCAAAGCCGAGAGCCCCTGGTTGTCAATCGTCTCAAGAGGATTCTTCATATGCTTTATCTCTGCCTTTAGCTCAACATGGAGGTGAGAAAAGTTCACATTACAGACATAACAACATTATACTTCTCAGTGATGATGAAGATGATGAAATGAAGATGCCAGATTTGAATAGAAAGAAGGAACATTCTCATATGCTTGCAGGTTCTAGAAATAAAGCAAGCCCATGTGACAATATAGAAAATACAAACTTGGCCCTCCCTGTGACAGATGCTGCTGTGATGGGTGAAAAGGATGCTATTACATTGCCTCGTGAAGATATGAGTTCGGGTTCAACTCAGCTTTTGCATGTGAAACAAGAATATCATGACCACGGAGGACCAGTTCTAGCTTCTACCCCAGTAGATCTTTCTTTTCATATAGGTCTTACTGGTGCAGAATCAGTTAGAAATATTTCAGCTTCTTCAGCAGTAGAGGCCCATGACCATTGTTTGGAAAGTTTGGAGCTTTGTCCTCTGAACCCACAGCACTCTGGCACTATCAAGGTTAAGAATGAGGATAATCAAGAAAAGTTTGGAGGATGTACCACTTCAAATGTGGCAGACAATGCAAGAGCTGTTAATGGAAACATCTCTTGCAGTTTAAACAATTACCGTCAGAAAGGTCCTCGTATTGCAAAGGTTGTCCGGCGTATCAACTGCAATGTTGAACCTTTGGAATTTGGAGTTGTGCTTTCTGGAAAGTTTTGGTGCAGCAGTCAGGCTATATTTACAAAGGGATTTAAAAGCCGTGTTAGATACATAAATGTCTTAGACCCATCCAGTATGTGTTACTATATTTCAGAAATTCTTGACGCTGGACGTGGTTGGCCTCTGTTTATGGTTTCTTTGGAAAATTGTCCAAGTGAGGTCTTCATTCATATATCAGCTACAAGATGCTGGGAACTGGTCAGAGAGAGAGTGAATCAAGAGATCACAAAGCAGCATAAGCTGGGAAGAAAGGGTCTTCCTCCTTTACAGCCTCCTGGCAGCCTTGATGGCTTTGAAATGTTTGGGTTTTCTTCACCTGCGATAGTGCAGGCTATTGAGGCACTGGATCGAGGTCGAGTTTGCAATGAATATTGGGACTCCCGGCCCTACTCACGGCCTCAAGGGCAGATTTCACAAGCTTACCAAACCAATGTAAATGGTGGAAATGATAAAGGGGTTCTCAAGAATCAGCAAATGCCAGTTGGAGTTGTTGCAGTACTAAGGAGCCTATTTAAAAAGGTCAATGCTGAAGAATTGAACTCATTGTACAGCATTCTTACTGACAATAAGCTAGCAGCTGACCGAACCCTAATTGCACAGCTTCTCGATGAAGAGATTCACAAATCCCAACCACCATAG | 3888 | 0.4177 | MDLVFLRKGEVPSLSKEDKSETSLHIAFCMRLLMGTELMRICVKEDNDDFPSVPPGFESYTSFSLKRVEDNDKQNDQNMTSCSASTSAPESHSTLVENDVQVRDTAAKVPKSRRRRPWINYGQYENSSEEDSDCERHDQNISSRPCLPKGVIRGCPDCSNCQKVVARWRPEDARRPNLEDAPVFYPTEEEFQDTLKYISSIRSRAEPYGICRIVPPSSWKPPCPLKEKSTWEGSKFATRVQRIDKLQNRDSGRKMSRNQSNMKRKRRRCTRMGVANGPGTGPNAVFFEAESFGFEPGPEFTLETFQRYADDFKVKYFKKNENVSHSSANTTNLNGTSEPSVENIEGEYWRMVESPTEEIEVLYGADLETGVFGSGFPSNSSHVGSTSHEQYIKSGWNLNNFARLPGSLLSYESSDISGVLVPWLYLGMCFSSFCWHVEDHHLYSLNYMHWGAPKMWYGVPGKDACKLEEAMRKHLPELFEEQPDLLHKLVTQLSPSILKSKGVPVYRCVQNPGDFVLTFPRAYHAGFNCGFNCAEAVNVAPVDWLPHGHIAIELYREQGRKTSISHDKLLLGAAREAVRAQWELNLLKKNSSGNLQWKDVCGKDGLLAKALKARVEMERARREFLCSSSQAFKMESSFDATSERECNVCFFDLHLSAAGCRCSPDRYACLDHAKQFCSCSWDSKFFLFRYDIGELNILVEALEGKLSAVYRWAKLDLGLALTSYVSADKETILKELRLQSSNLSHSSRAIVNKDVALHPSNKFIEDSQLIDVPIKDQAHSANSKDQSYLQQRKSAEAVSPLSHMKELLTFNSSKPTCEMANRKISVNKDESVNCRSKPRAPGCQSSQEDSSYALSLPLAQHGGEKSSHYRHNNIILLSDDEDDEMKMPDLNRKKEHSHMLAGSRNKASPCDNIENTNLALPVTDAAVMGEKDAITLPREDMSSGSTQLLHVKQEYHDHGGPVLASTPVDLSFHIGLTGAESVRNISASSAVEAHDHCLESLELCPLNPQHSGTIKVKNEDNQEKFGGCTTSNVADNARAVNGNISCSLNNYRQKGPRIAKVVRRINCNVEPLEFGVVLSGKFWCSSQAIFTKGFKSRVRYINVLDPSSMCYYISEILDAGRGWPLFMVSLENCPSEVFIHISATRCWELVRERVNQEITKQHKLGRKGLPPLQPPGSLDGFEMFGFSSPAIVQAIEALDRGRVCNEYWDSRPYSRPQGQISQAYQTNVNGGNDKGVLKNQQMPVGVVAVLRSLFKKVNAEELNSLYSILTDNKLAADRTLIAQLLDEEIHKSQPP* | 1296 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Rops6g01648 | 1295 | ProSiteProfiles | FYR domain FYRC motif profile. | 1121 | 1211 | IPR003889 | GO:0005634 | |
| Rops6g01648 | 1295 | MobiDBLite | consensus disorder prediction | 75 | 100 | - | - | |
| Rops6g01648 | 1295 | ProSiteProfiles | JmjC domain profile. | 393 | 556 | IPR003347 | - | |
| Rops6g01648 | 1295 | MobiDBLite | consensus disorder prediction | 829 | 848 | - | - | |
| Rops6g01648 | 1295 | Pfam | C5HC2 zinc finger | 646 | 696 | IPR004198 | - | |
| Rops6g01648 | 1295 | ProSiteProfiles | FYR domain FYRN motif profile. | 1061 | 1119 | IPR003888 | GO:0005634 | |
| Rops6g01648 | 1295 | ProSiteProfiles | JmjN domain profile. | 181 | 222 | IPR003349 | - | |
| Rops6g01648 | 1295 | SMART | cupin_9 | 393 | 556 | IPR003347 | - | |
| Rops6g01648 | 1295 | Pfam | F/Y-rich N-terminus | 1074 | 1116 | IPR003888 | GO:0005634 | |
| Rops6g01648 | 1295 | Pfam | F/Y rich C-terminus | 1124 | 1207 | IPR003889 | GO:0005634 |
Showing 1 to 10 of 23 entries
Duplication type information
Functional genes information
Transcription factors information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Rops6g01648 | K11446 | - | gmx:100800271 | 2182.53 |
Showing 1 to 1 of 1 entries