Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01631 ATGGGTTCCGCAACCAGAACCTTCTCCGCTGATCCCGCTGATTACAAGCTTCTAGAAGAAGTCGGTTACGGTGCAAGCGCAACCGTCTACCGCGCAATCTACATACCTCAAAACAAAGAGTTGGCAGTTAAGTGCCTCGATCTGGATCGCTGCAACTCCAATTTGGAAGATATTCGTAGGGAAGCGCAGATGATGAGCTTAATCGATCACAGGAACATTGTGAAGTCGTTTTGTTCCTTCGTTGTGGAACAAAAGCTTTGGGTTGTTATGCCTTTCATGGCGCAGGGTTCGTGCTTGCACCTCATGAAGTCTGCATATCCTGATGGATTTGAAGAGGACGCAATCGGATCCATACTCAAAGAGACTCTGAAGGCGTTGGAGTATCTACATCGACATGGCCACATTCATCGCGATGTTAAGGCTGGTAATATTTTACTCGATTCTAATGGTGAAGTCAAACTCGCCGACTTTGGTGTTTCCGCTTCTATGTTTGATACTGGCGATCGACGACGTTCTAGAAACACTTTTGTTGGAACTCCTTGCTGGATGGCGCCGGAGGTATTGCAACCTGGAACTGGTTATAATTTCAAGGCTGATGTTTGGTCTTTTGGAATTACGGCTCTGGAGTTGGCTCATGGTCATGCTCCCTTCTCCAAATATCCTCCCATGAAGGTTCTTCTAATGACCATACAGAATGCCCCTCCGGGACTTGATTATGATCGTGATAGAAAGTTCTCTAAGTCTTTTAAGGAAATGGTTGCTATGTGCCTGGTAAAAGATCAAACAAAGAGGCCATCTGTGGAGAAGTTACTCAAACACTCCTTCTTCAAACAAGCTAAACCACCGGAGCTCTCTGTGAAGAAATTATTTGCTGATTTACCACCTCTTTGGAATCGTGTAAAAGCCCTCCAGCTTAAAGATGAAGCTCAATTAGCACTAAAGAAAATGGCTTCTGCAGAACAAGAAGCAATATCTCAGAGTGAATATAAGCGAGGAGTTAGTGCGTGGAACTTCGATATTGATGACTTGAAAGCTCAAGCTTCATTGGTGCAGGATGATGATGATATTGCAGAGATGAGGGAAGAAGATGAAAATAAATTCTTCAACTCTTCCAAGGATACAACTGATCCCCAATGTAGTGTGAGCAAAAAGAATTCAGATAACTTACAACAAGATGAGTTCATGTCACAAGTTGGTGGTAATGACATACCTCAGGGTGAGAAGAGAAATGGATCAATTGCTGAAGCAAAACCATCTACCTCAGAGAAGGATATGGGAACAAGCAAGGTTAAAACTCAATCATTGAAAACTGGTAAAACCCAAAGTGGGCCGCTGGTGCCAGGCACAGTGCTTGGTCATTCTTTTCCAGAAAGAGGGCGTGCATTTGACAGGTTTGAGAATGAAAATCAGTTATCAAGTGAGAAAAGTAACCGTGATATACGACGAGCTCCGAGCTTTAGTGGTCCATTAATGCTTCCAAACCGAGCTTCAGCAAATAGTTTATCGGCTCCAATAAAATCTTCTGGAGGATTCAGAGATTCCTCAGATGATAAGTCTAAGGCTAATCTAGTGCAAATTAAAGGACGGTTCTCAGTGACATCAGAAAATTTAGATCTGGTGAAGGATATTCCTGTAAGTTCAGTTTCACGCCGATCTTCACAGGGATCACCACTGAGGAAATCTGCCAGTGTTGGTGATTGGATGTTGGATTCCAAACAAATGCCAAGTGGACAGTCCTCCAATGATTCTGCCAATATCAATATTCCTGCATCACTTCTTGTGCCTCACCTTCACAGTCTTTTGCAGCAGACATCTATGCAACAGGATCTTATTATGAATATGTTGACTAGCTTGCAAAATGCTGAGGCAGTTGATGCTTCTCAGAATGGAAAGTTGCCACCATTACCTCGCAGTTCAGAGAACAATGGATGTGTTGATACAGCAGTTTCAGAGAGGGAACATCTTCTGCTGGTCAAAATTTCAGAACTTCAGTCTTGGATGATCAATTTGACCGATGAACTGACTTCTGAGAGGTTGAAATGCATGCAGTTGCAACAACAGCTAGCTGCTCTCTACAGCCAGGAACAAAACGGGGAAAGAGAGGAAGTTGCATGA 2115 0.4336 MGSATRTFSADPADYKLLEEVGYGASATVYRAIYIPQNKELAVKCLDLDRCNSNLEDIRREAQMMSLIDHRNIVKSFCSFVVEQKLWVVMPFMAQGSCLHLMKSAYPDGFEEDAIGSILKETLKALEYLHRHGHIHRDVKAGNILLDSNGEVKLADFGVSASMFDTGDRRRSRNTFVGTPCWMAPEVLQPGTGYNFKADVWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDRKFSKSFKEMVAMCLVKDQTKRPSVEKLLKHSFFKQAKPPELSVKKLFADLPPLWNRVKALQLKDEAQLALKKMASAEQEAISQSEYKRGVSAWNFDIDDLKAQASLVQDDDDIAEMREEDENKFFNSSKDTTDPQCSVSKKNSDNLQQDEFMSQVGGNDIPQGEKRNGSIAEAKPSTSEKDMGTSKVKTQSLKTGKTQSGPLVPGTVLGHSFPERGRAFDRFENENQLSSEKSNRDIRRAPSFSGPLMLPNRASANSLSAPIKSSGGFRDSSDDKSKANLVQIKGRFSVTSENLDLVKDIPVSSVSRRSSQGSPLRKSASVGDWMLDSKQMPSGQSSNDSANINIPASLLVPHLHSLLQQTSMQQDLIMNMLTSLQNAEAVDASQNGKLPPLPRSSENNGCVDTAVSEREHLLLVKISELQSWMINLTDELTSERLKCMQLQQQLAALYSQEQNGEREEVA* 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01631 704 FunFam serine/threonine-protein kinase BLUS1-like isoform X2 96 326 - -
Rops6g01631 704 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 7 677 IPR047173 GO:0043539
Rops6g01631 704 MobiDBLite consensus disorder prediction 414 444 - -
Rops6g01631 704 Pfam Protein kinase domain 15 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g01631 704 MobiDBLite consensus disorder prediction 546 560 - -
Rops6g01631 704 FunFam Serine/threonine-protein kinase BLUS1 4 92 - -
Rops6g01631 704 MobiDBLite consensus disorder prediction 546 581 - -
Rops6g01631 704 CDD STKc_OSR1_SPAK 14 276 - -
Rops6g01631 704 MobiDBLite consensus disorder prediction 463 495 - -
Rops6g01631 704 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Rops6g01631 704 Coils Coil 667 701 - -
Rops6g01631 704 MobiDBLite consensus disorder prediction 500 519 - -
Rops6g01631 704 Coils Coil 302 322 - -
Rops6g01631 704 SMART serkin_6 15 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g01631 704 MobiDBLite consensus disorder prediction 463 481 - -
Rops6g01631 704 ProSiteProfiles Protein kinase domain profile. 15 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops6g01631 704 MobiDBLite consensus disorder prediction 363 449 - -
Rops6g01631 704 MobiDBLite consensus disorder prediction 371 398 - -
Rops6g01631 704 Gene3D Transferase(Phosphotransferase) domain 1 96 329 - -
Rops6g01631 704 SUPERFAMILY Protein kinase-like (PK-like) 14 320 IPR011009 -
Rops6g01631 704 Gene3D Phosphorylase Kinase; domain 1 4 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01631 Rops-Chr6 33296420 33304671 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g01631 8 696 MAP Kinase Kinase Kinase Kinase AT4G10730 65.808 0.0 900
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Rops6g01631 Pkinase 1.1e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01631 - - gmx:100783699 1201.04