Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01630 ATGGCCAATCTTTTGAGTCATAACAGGTTCTTGGTGTCTCTTTTGATTGCATTGGTCCAAATCCAAACCAAGGTGCTGTGCTACCAATACAAAGTTGGAGATCTACATTCTTGGGGGATACCCACCTCAGCAGATCCACAAGTCTATTCCAAATGGTCCAAAACTCTCAATCTCAAGCTTGGAGACTCCCTTTTGTTTCTATACCCACCAAGTCAAGATTCAGTGATTCAAGTAACAGAGGAATCCTACAAGAGCTGCAACCTTAAAAACCCAATATTGTATATGAACAATGGGAACTCTTTGTTTAACATAACATCAAATGGAGAATTCTACTTCACCAGTGGAGAGGCTGGTCAGTGCCAAAAGAATCAGAAGCTTTATATATCTGTGGGTGGAGTAAAAGGAGGGAAGGCAAATATGGATGCAGCACCTGGTCCAAGTTCATTGTCTGCAAATGCACCTTCATATCCCACAGTATTTGGCAACATTCCAGTAGCTCCTTCTTCTTCCTCAGCCTCACCTCAGCTAACTACAGCTTTTCAAGTCCTCATCATTGGATCTATGATATGTGCTCTCTTCTCTGTCTTAATGTAA 594 0.4175 MANLLSHNRFLVSLLIALVQIQTKVLCYQYKVGDLHSWGIPTSADPQVYSKWSKTLNLKLGDSLLFLYPPSQDSVIQVTEESYKSCNLKNPILYMNNGNSLFNITSNGEFYFTSGEAGQCQKNQKLYISVGGVKGGKANMDAAPGPSSLSANAPSYPTVFGNIPVAPSSSSASPQLTTAFQVLIIGSMICALFSVLM* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01630 197 FunFam Early nodulin-like protein 1 27 135 - -
Rops6g01630 197 PANTHER BLUE COPPER PROTEIN 26 158 IPR039391 GO:0009055
Rops6g01630 197 ProSiteProfiles Phytocyanin domain profile. 28 132 IPR003245 GO:0009055
Rops6g01630 197 Pfam Plastocyanin-like domain 47 123 IPR003245 GO:0009055
Rops6g01630 197 Gene3D - 28 141 IPR008972 -
Rops6g01630 197 SUPERFAMILY Cupredoxins 27 130 IPR008972 -
Rops6g01630 197 CDD OsENODL1_like 28 130 IPR041846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01630 Rops-Chr6 33291365 33292352 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g01630 11 197 Phytocyanin Superfamily AT1G64640 50.267 1.03e-51 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01630 - - gmx:100527517 283.878